DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plum and Fas2

DIOPT Version :9

Sequence 1:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster


Alignment Length:1158 Identity:227/1158 - (19%)
Similarity:361/1158 - (31%) Gaps:447/1158 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 PVLKRLFPGQQ-QAANISALENKPLVLSC-PFLSVPA--ARFSWYFGNDSLTNDNSALILTNG-- 214
            |:|: ::|.|: |...:    .|||:|:| |.:..|:  |...|   .|:  .:|:.|...||  
  Fly    31 PILE-IYPKQEVQRKPV----GKPLILTCRPTVPEPSLVADLQW---KDN--RNNTILPKPNGRN 85

  Fly   215 --------------TLILRHLRLEQAGKYKCVAQ--NTFASKTHRQFIWQLQVEPKDATFYPKNE 263
                          .|::..|.:|..|||.|.|.  ||             ::..|..|.  |..
  Fly    86 QPPMYTETLPGESLALMITSLSVEMGGKYYCTASYANT-------------EILEKGVTI--KTY 135

  Fly   264 AGITETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVADFVPIVWYLQPPNNKMVRLSNNSVAYS 328
            ..||.|...|.|          :...|...::.|...||..|.:.:|:  |...:|.:|:.....
  Fly   136 VAITWTNAPENQ----------YPTLGQDYVVMCEVKADPNPTIDWLR--NGDPIRTTNDKYVVQ 188

  Fly   329 ITNASIARH-----EGRYSC-ITPLET-----QNFQVIVTTPPRIVSRLPVEVVYI-GLSRTLTC 381
             ||..:.|:     ||.|:| ...:||     :..:|.|...|.|:| ||..:..: |......|
  Fly   189 -TNGLLIRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIIS-LPTNLEAVEGKPFAANC 251

  Fly   382 RAEGHPEPSITWYHNGVHLNSSYTRYISGNE----LHVHSFDSKEEGIYQCVARNVAGEDSATGE 442
            .|.|.|.|.|:|..:...||.:.......|.    :.:.|....:.|.|.|:|:|.||       
  Fly   252 TARGKPVPEISWIRDATQLNVATADRFQVNPQTGLVTISSVSQDDYGTYTCLAKNRAG------- 309

  Fly   443 LRFNRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRNNPHSWTSFSPMKLNQTSYV 507
                                        ..|.:|                       |||    |
  Fly   310 ----------------------------VVDQKT-----------------------KLN----V 319

  Fly   508 VISTDLPVYEPFALITRVLFPTTEVRTGTLVPQQMILSSLRSTPVTCCTQGLMLRPI-AVGNDTF 571
            ::...  :||        |:..|..||             :...:||..:|   ||. |:   ||
  Fly   320 LVRPQ--IYE--------LYNVTGART-------------KEIAITCRAKG---RPAPAI---TF 355

  Fly   572 VKW------SQGQLENKKYFILQFSINHTHPHPAQLLNGSLQGTL-TSVEEKADQVRHHLTEIQP 629
            .:|      :.||.::....||:.:.:..        .|...||| .|..|::|.   .|.:...
  Fly   356 RRWGTQEEYTNGQQDDDPRIILEPNFDEE--------RGESTGTLRISNAERSDD---GLYQCIA 409

  Fly   630 LNQSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVDASVTGILLQR---FTRIKMRVLIITTENE 691
            .|:.|.|....::         |:|...| ||.:.:........||   .:.:.|.:...|.|..
  Fly   410 RNKGADAYKTGHI---------TVEFAPD-FSHMKELPPVFSWEQRKANLSCLAMGIPNATIEWH 464

  Fly   692 FLG---QDFRYVQWKIIENGTSEQSNMPFRLVTRESRALAFKFLDS-----------LNETCVLE 742
            :.|   :|......||:  ||..:|::....|||:..: .:|.:.:           |.|..|.:
  Fly   465 WNGRKIKDLYDTNLKIV--GTGPRSDLIVHPVTRQYYS-GYKCIATNIHGTAEHDMQLKEARVPD 526

  Fly   743 CHTEIQ-----------------AQMSLPSQDPKCQDRNIAN--------------SLLLVTGLK 776
            ..:|.:                 .::.||......|.:...|              |..:|.||:
  Fly   527 FVSEAKPSQLTATTMTFDIRGPSTELGLPILAYSVQYKEALNPDWSTAYNRSWSPDSPYIVEGLR 591

  Fly   777 PDTRYNLHFYNCKTRIFYGDIDEKTEQDPP------------GTISNSKLIKQNGLKLMWEPPIN 829
            |.|.|:..| ..:.::..|:.....:|..|            ..:.:.|           |.|:.
  Fly   592 PQTEYSFRF-AARNQVGLGNWGVNQQQSTPRRSAPEEPKPLHNPVQHDK-----------EEPVV 644

  Fly   830 PNGRVHHYDIRWSLDNVTHEAI----VKECTKCSYKFPNVSETAKIHVAVRVMGDTGAGAPMYFD 890
            .:....|:::||.:.....|.|    :|.|.                 .|::.|           
  Fly   645 VSPYSDHFELRWGVPADNGEPIDRYQIKYCP-----------------GVKISG----------- 681

  Fly   891 MINNNHTWLKEESESSHSEVYSGIAIGSLLSIACVFLFGLFIIFQQRNFKARAQGPTHLTTPTDI 955
                  ||.:.|:..:..||                                             
  Fly   682 ------TWTELENSCNTVEV--------------------------------------------- 695

  Fly   956 NFGNLSSASGMPGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIELLPEHSLEYQTSTAAVAVVHLA 1020
                                   ::....||..|:..:.|.|||...:::.|  |:.|..::...
  Fly   696 -----------------------METTSFEMTQLVGNTYYRIELKAHNAIGY--SSPASIIMKTT 735

  Fly  1021 NGNGSVQVARRSDQDGAAQGDLGIAG---------------VHNLSQLPLCGVGGTSPERKTVQD 1070
            .|...:|||.|.....||...:.|.|               ||......:|.....||..  :.|
  Fly   736 RGIDVIQVAERQVFSSAAIVGIAIGGVLLLLFVVDLLCCITVHMGVMATMCRKAKRSPSE--IDD 798

  Fly  1071 AMLQEAK-------AFYIPYRHTPPNAVALSSSKQCAVPSGSELEVIVPPNSLPLVTTMPGLGVV 1128
                |||       .|.:||               |:    .:|....||:.|||    |....:
  Fly   799 ----EAKLGSLYGWRFPLPY---------------CS----GQLVKEPPPSPLPL----PPPVKL 836

  Fly  1129 GGGGSGGGGVGGSSRRSGSLSSSSASSSSNGSSKK----QFHTNFVRHSNSND 1177
            ||           |..|..|.......:..||.|:    :|...|| ||.|.:
  Fly   837 GG-----------SPMSTPLDEKEPLRTPTGSIKQNSTIEFDGRFV-HSRSGE 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_001163744.1 IG_like 170..241 CDD:214653 24/91 (26%)
IGc2 175..235 CDD:197706 22/80 (28%)
IG_like 284..356 CDD:214653 19/82 (23%)
I-set 360..443 CDD:254352 24/87 (28%)
IGc2 378..435 CDD:197706 16/60 (27%)
FN3 804..886 CDD:238020 13/97 (13%)
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 28/117 (24%)
IG_like 144..226 CDD:214653 21/94 (22%)
IGc2 152..209 CDD:197706 16/59 (27%)
I-set 230..319 CDD:254352 29/151 (19%)
IGc2 243..309 CDD:197706 17/65 (26%)
IG_like 330..424 CDD:214653 27/132 (20%)
IGc2 339..412 CDD:197706 21/89 (24%)
Ig 447..518 CDD:143165 14/73 (19%)
fn3 534..611 CDD:278470 13/77 (17%)
FN3 640..735 CDD:238020 26/198 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452265
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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