DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plum and kirre

DIOPT Version :9

Sequence 1:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_001245505.1 Gene:kirre / 31292 FlyBaseID:FBgn0028369 Length:956 Species:Drosophila melanogaster


Alignment Length:1339 Identity:249/1339 - (18%)
Similarity:398/1339 - (29%) Gaps:623/1339 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLFVIQLIEILLLLL------------------TDHNGRLTLTKE-------STTVAAAVA---- 43
            ||.|:.||.:|:|.|                  :.|:|..:.:..       |::.||:.|    
  Fly     8 RLLVLPLILVLILTLLLQPIAVHAKSKKNKSSQSSHHGDSSSSSSSSSSSSGSSSAAASSANDES 72

  Fly    44 QPKNST------ALQPYLQIQKHAV-TRLTISKPHSPYYLPCIPILTPYNHDQDNQPIYCSWYRN 101
            :||...      |::|  |.|...| :|:|         |||                       
  Fly    73 KPKGGDNGGQHFAMEP--QDQTAVVGSRVT---------LPC----------------------- 103

  Fly   102 DVVVEQV---SYRKNDFFIYDNGTLRLPTNEKASG-EYYCKIEWDESAVISDRITVEYPVLK--- 159
             .|:|:|   .:.|:||        .|..:...|| |.|..:..||....|..|   ||::.   
  Fly   104 -RVMEKVGALQWTKDDF--------GLGQHRNLSGFERYSMVGSDEEGDFSLDI---YPLMLDDD 156

  Fly   160 -----RLFPGQQ-------QAANISAL-----------------ENKPLVLSCPFL-SVPAARFS 194
                 ::.||.|       :.|.::.|                 |::.:.|.|... ..|||..:
  Fly   157 AKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQGDYLVTTEDREIELECVSQGGKPAAEIT 221

  Fly   195 WYFGNDSLTNDNSALILTNGTLILRHLR--------------LEQAGK-------YKCVAQNTFA 238
            |.   |.|.|     :||.|   :.:::              |:.|.|       :.|.|||| |
  Fly   222 WI---DGLGN-----VLTKG---IEYVKEPLADSRRITARSILKLAPKKEHHNTTFTCQAQNT-A 274

  Fly   239 SKTHRQFIWQLQVEPKDATFYPKNEAGITETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVAD- 302
            .:|:|.....|:|:     :.||....:...|::..:           :|.|..|:|.|.|.|: 
  Fly   275 DRTYRSAKLLLEVK-----YAPKVIVSVVGGALAGGK-----------IPEGAEVILSCQADANP 323

  Fly   303 -FVPIVWYLQPPNNKMVRLSNNSVAYSITNASIARHEGRYSC----ITPLETQNFQVIVTTPPRI 362
             .:...|::    |..:...:.:....|.|.|...|:....|    ......|:.::.::..| :
  Fly   324 HELSYRWFI----NDELMTGDFTTKMIIHNVSRQYHDAIVKCEVVNAVGKSEQSKKLDISFGP-V 383

  Fly   363 VSRLPVEV-VYIGLSRTLTCRAEGHPEPSITWYHNGVHLNSSYTRYISGNELHVHSFDSKEEGIY 426
            ..:.||.| ..:|.:.::.|...|:|||.|.|              ||.|...|           
  Fly   384 FRQRPVSVEADLGATVSMRCDVAGNPEPEIEW--------------ISENSDQV----------- 423

  Fly   427 QCVARNVAGEDSATGELRFNRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRNNPH 491
                ..||.|                               :.:...|.|....|...:|...|.
  Fly   424 ----VGVAAE-------------------------------LKLKVSSETAGRYFCKAVVNGFPE 453

  Fly   492 SWTSFSPMKLNQTSYVVISTDLPVYEPFA-LITRVLFPTTEVRTGTLVPQQMILSSLRSTPVTCC 555
                             |..:..:|...| :||     :.:|:.|                    
  Fly   454 -----------------IGAEATLYVKRAPIIT-----SHKVQFG-------------------- 476

  Fly   556 TQGLMLRPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHPAQLLNGSLQGTLTSVEEKADQV 620
                     .||         |::   |...|.|||    |....:| .|.:|.:.::......:
  Fly   477 ---------GVG---------GRV---KIDCLAFSI----PKAEHIL-WSFEGKIINMSSADPDI 515

  Fly   621 ----RHHLTEIQPLNQSAAATVLR---------------NVEHEDNVVDDTLELEDDI-FSLVVD 665
                .|||.|     ...||.::|               |....|::|...|....:| ..|||.
  Fly   516 YIFEEHHLPE-----GVRAALIIRDSKATHFGKYNCTVMNSYGGDSLVITLLREPGNIPVLLVVM 575

  Fly   666 ASVTGILLQRFTRIKMRVLIITTENEFLGQDFRYVQWKIIENGTSEQSNMPFRLVTRESRALAFK 730
            .|:..:.:     |.|.|:||.                :.....|.:..||..::...||.    
  Fly   576 GSMFCVAI-----ILMIVMIII----------------VYRKRRSRKKPMPADVIPEASRG---- 615

  Fly   731 FLDSLNETCVLECHTEIQAQMSLPSQD--------------------PKCQDRNIANSLLLVTGL 775
             .|.||         |:::::...:.|                    |..|.:.....:.|...:
  Fly   616 -GDKLN---------ELKSELRSKAYDVEYSEAGGDGLAINLTQSPMPDVQMKGATLGVPLAGPV 670

  Fly   776 KPDTRYNLHF----YNCKTRIFYGDIDEKTEQDPPGTISNSKLIKQNGLKLMWEPPINPNGRVHH 836
            |.|.|::..|    ||.:..|                    |.:| |..:..::.....||..|:
  Fly   671 KFDERFSGDFGGDRYNRQCHI--------------------KNLK-NQQETAYKGSPQANGYAHY 714

  Fly   837 YDIRWSLDNVTHEAIVKECTKCSYKFPNVSETAKIHVAVRVMGDTGAGAPMYFDMINNNHTWLKE 901
            ::  ::||               |..|. .|.|.:     |:|..|.|                 
  Fly   715 FE--YALD---------------YSPPG-GEGAAV-----VVGSGGVG----------------- 739

  Fly   902 ESESSHSEVYSGIAIGSLLSIACVFLFGLFIIFQQRNFKARAQGPTHLTTPTDINFGNLSSASGM 966
                                                  |.:..|....|.|.       |:|:.:
  Fly   740 --------------------------------------KLKNGGMNSATLPH-------SAAATV 759

  Fly   967 PGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIELLPEHSLEYQTSTAAVAVVHLANGNGSVQVARR 1031
            .|..||...|.:|           ||::.|                            .:|.:::
  Fly   760 NGGGAGNGGGASL-----------PRNQRH----------------------------EIQQSQQ 785

  Fly  1032 SDQDGAAQGDLGIAGVHNLSQLPLCGVGGTSPERKTVQDAMLQEAKAFY-IPYRHT--------- 1086
            |:      |.||         .||            :|:.:.....|.| .||..|         
  Fly   786 SN------GFLG---------QPL------------LQNGIDSRFSAIYGNPYLRTNSSLLPPLP 823

  Fly  1087 PPNAVALSSSKQCAVPSGSELEVIVPPNSLP-----------------------LVTTMP--GLG 1126
            ||     |::...|.|:        ||   |                       ::||.|  .:.
  Fly   824 PP-----STANPAATPA--------PP---PYHAARHGHAHHANGGLKHFVGGAVITTSPVGNVN 872

  Fly  1127 VVGGGG-----SGGGGVGGSSRRSGSLSSSSA--SSSSN 1158
            :.||||     |||||||......||:|.||:  ::|||
  Fly   873 INGGGGGGSTPSGGGGVGVGVAAGGSVSGSSSNLTASSN 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_001163744.1 IG_like 170..241 CDD:214653 23/109 (21%)
IGc2 175..235 CDD:197706 18/81 (22%)
IG_like 284..356 CDD:214653 15/77 (19%)
I-set 360..443 CDD:254352 19/83 (23%)
IGc2 378..435 CDD:197706 12/56 (21%)
FN3 804..886 CDD:238020 16/81 (20%)
kirreNP_001245505.1 Ig 87..183 CDD:299845 30/141 (21%)
IG_like 88..182 CDD:214653 30/139 (22%)
C2-set_2 189..279 CDD:285423 23/101 (23%)
Ig_2 307..379 CDD:290606 15/75 (20%)
I-set 382..462 CDD:254352 25/157 (16%)
IGc2 396..446 CDD:197706 18/109 (17%)
Ig 466..561 CDD:299845 26/150 (17%)
IG_like 478..561 CDD:214653 22/104 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11640
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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