DRSC/TRiP Functional Genomics Resources

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Protein Alignment plum and Igdcc3

DIOPT Version :9

Sequence 1:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_001344186.1 Gene:Igdcc3 / 19289 MGIID:1202390 Length:813 Species:Mus musculus


Alignment Length:682 Identity:146/682 - (21%)
Similarity:229/682 - (33%) Gaps:192/682 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PGQQQAANISALENKPLVLSCPFLSVPAARFSWYFGNDSLTNDNSALILTNGTLILRHLRLEQAG 227
            |||            |:||.|.....|..:.||......|.......:|.||:|::.|.||||.|
Mouse    67 PGQ------------PIVLGCKVEGTPPVQVSWRKNGAELPEGTHTTLLANGSLLIHHFRLEQGG 119

  Fly   228 K------YKCVAQNTFASKTHRQ---------------------------------------FIW 247
            .      |:|||||.|.....|:                                       ..|
Mouse   120 SPSDEGDYECVAQNRFGLLVSRKARLQAATMSDFHVHPQAVTGEEGGVARFQCQIHGLPKPLITW 184

  Fly   248 QLQVEPKDA-----TFYPK----------NEAGITETAVSEAQLLPAFQNATVFVPAGGS----- 292
            :....|.|.     |..||          .::||.....|....:.....|.:.|...||     
Mouse   185 EKNRVPIDTDDERYTLLPKGVLQITGLRAEDSGIFHCVASNIASVRVSHGARLTVSGSGSGTYKE 249

  Fly   293 -----------------VLLQCHAVADFVPIV-WYL---QPPNNKMVRL--SNNSVAYSITNASI 334
                             .:|:|.|..:..||| |..   :|...:.:::  :.|.:...:|    
Mouse   250 PTILVGPENLTLTVHQTAVLECVATGNPRPIVSWSRLDGRPIGVEGIQVLGTGNLIISDVT---- 310

  Fly   335 ARHEGRYSCITPLETQNFQVIVTTPPRIVSRLPVEVVY--------IGLSRTLTCRAEGHPEPSI 391
            .:|.|.|.|..  .....:|..|...|:|.:.|.|.|.        .|.:...||:|:|.|.|.:
Mouse   311 VQHSGVYVCAA--NRPGTRVRRTAQGRLVVQAPAEFVQHPQSISRPAGTTAMFTCQAQGEPPPHV 373

  Fly   392 TWYHNGVHLNS-SYTRYISGNE-LHVHSFDSKEEGIYQCVARNVAGEDSATGELRFNRQLEEVNP 454
            ||..||..|.: .:.|..:.|. |.:.....::|.||||||.|:||...|:..|..........|
Mouse   374 TWLKNGQVLGAGGHVRLKNNNSTLSISGVGPEDEAIYQCVAENIAGSSQASARLTVLWAEGLPGP 438

  Fly   455 LQNIRCYPHSFHSINITFDSRTL--TSMFVVYIVRNNPHSWTSFSPMKLNQTSYVVISTDLPVYE 517
            .:|:|....|...:.::: |..|  |...:.|::    |...:....||.....|..||      
Mouse   439 PRNVRAVSVSSTEVRVSW-SEPLAHTKEIIGYVL----HIRKAADSPKLEYQEAVSKST------ 492

  Fly   518 PFALITRVLFPTTEV---------RTGTLVPQQMILSSLRSTPVTCCTQGLMLRPIAV---GNDT 570
             |..:.|.|.|:|..         |..:|.....:.|:|...||.        .|::|   |:.:
Mouse   493 -FQHLVRDLEPSTAYSFYIKAYTPRGASLASVPTLASTLGEAPVP--------PPLSVRLLGSSS 548

  Fly   571 ----FVKWSQGQLENKKYFILQFSINHTHPHPAQLLNGS--LQGTLTSVEEKADQVRHHLTEIQP 629
                :..|.:....|..:.:..      .|..|....|.  |.||::|         ::|:::.|
Mouse   549 LQLLWKPWPRLAQHNGGFKLFY------RPVSATSFTGPILLPGTVSS---------YNLSQLDP 598

  Fly   630 LNQSAAATVLRNVEHEDNVVDDTLEL----------------EDDIFSLVVDASVTGILLQRFTR 678
            ........:..|...:.|.....:.|                ::|:.:   ..|.|||::.  ..
Mouse   599 STVYEVKLLAYNQHGDGNATVRFVSLKGASERTALTPPCDCRKEDVTN---HTSTTGIVIG--IH 658

  Fly   679 IKMRVLIITTENEFLGQDFRYVQWKIIENGTS 710
            |.:..:|........||..|.:..|.:||..|
Mouse   659 IGVTCIIFCVLFLLFGQRGRVLLCKDVENQLS 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_001163744.1 IG_like 170..241 CDD:214653 25/76 (33%)
IGc2 175..235 CDD:197706 22/65 (34%)
IG_like 284..356 CDD:214653 18/99 (18%)
I-set 360..443 CDD:254352 31/92 (34%)
IGc2 378..435 CDD:197706 22/58 (38%)
FN3 804..886 CDD:238020
Igdcc3NP_001344186.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Ig 56..147 CDD:325142 29/91 (32%)
Ig 158..239 CDD:325142 10/80 (13%)
Ig_3 250..321 CDD:316449 14/74 (19%)
I-set 343..429 CDD:254352 29/85 (34%)
FN3 436..529 CDD:238020 21/104 (20%)
fn3 <556..615 CDD:306538 12/73 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 689..724 1/2 (50%)
DNA_pol3_gamma3 <690..>812 CDD:331207 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 775..813
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4221
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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