DRSC/TRiP Functional Genomics Resources

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Protein Alignment plum and unc-40

DIOPT Version :10

Sequence 1:NP_651482.3 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:NP_491664.1 Gene:unc-40 / 172233 WormBaseID:WBGene00006776 Length:1415 Species:Caenorhabditis elegans


Alignment Length:1459 Identity:288/1459 - (19%)
Similarity:456/1459 - (31%) Gaps:483/1459 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SPYYLPCIPILTPYNHDQDNQPIYCSWYRNDVVV-EQVSYRKNDFFIYDNGTLRLPTNEKA-SGE 134
            |.:.|.|..:|.   |::....:...|.|:.|:: |:.|.|   ..:..||:|.:.:...| .|.
 Worm    57 SSHLLECSYVLA---HERLVHDVRIEWKRDGVLLSERTSSR---IKVMSNGSLWIESVSSAEEGT 115

  Fly   135 YYCKIEWDESAVISDRITVEYPVLKR--------LFPGQQQAANISALENKPLVLSCPFLSVPAA 191
            |.|.:   .....||:.:..:..|.|        |...:.||.:.:..:.:|....|...|.|..
 Worm   116 YQCAV---HVTTKSDQTSDTWTFLSRKATLRLADLAKFELQAIDRTLAKGQPTAFHCLINSKPTP 177

  Fly   192 RFSWYFGNDSLTNDNSALIL-TNGTLILRHLRLEQAGKYKCVAQNTFASKTHRQFIWQLQVEPKD 255
            ...|...::.:.|.....|| .:.||.:...:....|.|:|..:.  |.|.......:|.|    
 Worm   178 TAVWLHNDEPIVNGGEYHILPVSNTLEISSTQSRHEGTYRCTVEG--AGKRRSSQTARLTV---- 236

  Fly   256 ATFYPKNEAGITETAVSEAQLL--PAFQNATVFVPAGGSVLLQCHAVADFVPIVWYLQPPNNKM- 317
                      .|||..:|...:  |..|    .|..|...||:|...:...|.|.:|:.....: 
 Worm   237 ----------TTETVSNELVFITTPRLQ----VVEQGDEFLLECLVASLIRPQVRWLKDSRQIIV 287

  Fly   318 --VRLSNNSVAYSITNASIARHEGRYSCITPLETQNF----QVIVTTPPRIVSRLPVEVVYIGLS 376
              ||:....|:..:.:.:.....|.|:|.......:.    .|.|..||||.:|...:|......
 Worm   288 DGVRIRRVGVSSILVSRASIEDTGLYTCRASNNDDSIDRAVSVEVRAPPRITTRPTTKVAVETAD 352

  Fly   377 RTLTC-RAEGHPEPSITWYHNGVHLNSSYTRYISGNELHVHSFDSKEEGIYQCVARNVAGEDSAT 440
            ..|.| .|...||..:.||.||..:..|....|..|.|.:......::.||||:|.|..|.:.|:
 Worm   353 VELECGTAAARPEARVNWYKNGEAIIGSEYFVIEPNRLRILGVVRADQAIYQCIAENDVGSEQAS 417

  Fly   441 GELRFNRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRNNPHSWTSFSPMKLNQTS 505
            .:|..:..                        ||.::.:...|        ..||.:|:.|..||
 Worm   418 AQLLVDAP------------------------DSSSVAASSGV--------PMTSSAPLGLRSTS 450

  Fly   506 ----YVVISTDLPV--------YEPF---ALITR---VLFPTTEVRTGTLVPQQMIL-------- 544
                ::.:..|.||        |..|   .||.|   :...:|.....:|.|..|.|        
 Worm   451 SGSRFINVEWDPPVQRNGNIMRYHIFYKDNLIDRERMINSSSTSATLTSLQPSTMYLIRVTAENE 515

  Fly   545 -------SSLRSTPVTCCTQGL-----MLRPIAVGNDTF-VKWSQ---GQ-------------LE 580
                   .||:.|  |...|.:     .|...|.|.:|. ::||.   ||             ||
 Worm   516 AGMGKFSDSLKVT--TNKEQAVPGKVASLTTTATGPETIDIRWSPPSGGQPALRYKIFYSHDPLE 578

  Fly   581 -NKKYFILQFSINHTHPH------------PAQLLNGS-LQGTLTSVEEKADQVRHHLTEIQPLN 631
             |:|..::..|..|...|            .|:..||| |......|..::|:     ....|:|
 Worm   579 KNEKETLITTSTTHYTLHGMDKYTGYQIRIEAEGSNGSGLSSDTVKVRTQSDE-----PSAPPVN 638

  Fly   632 QSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVDASVTGILLQRFTR---IKMRVLII-TTENEF 692
            ..|.|....:|    .|..|..|.|.      |:..:||..|:..|:   .|...|:| .|..|:
 Worm   639 IQAEADSSTSV----RVSWDEPEEES------VNGEITGYRLKYKTKARGAKGNTLVIDATAREY 693

  Fly   693 ----LGQDFRY-VQWKII-ENGTSEQS-----NMPFRLVTRESRAL------------------- 727
                |..:.:| ::..:: .|||...|     :.|.:  .:|.|.|                   
 Worm   694 TMGNLEPNTQYLIRMAVVNHNGTGPFSDWVSIDTPGQ--DKEERTLGAPREIRPHAGIDYILVSW 756

  Fly   728 -------------------------AFKFLDSLNETCVLECHTEIQAQMSL-------------- 753
                                     ..:...|..:..:...|:|....:||              
 Worm   757 LPPADEQNLVRGYQIGWGLSVPDTETIRVTASTTQYKIARLHSERDYVISLRAFNNLGSGFPIYE 821

  Fly   754 ---------PS---QDPKCQDRNIANS-------------------------------------- 768
                     ||   :|....|.::.:|                                      
 Worm   822 TVRTLSRETPSHFNEDSDSDDSDVGSSESTPVGVRAEAISATSIRVMWTESDETAFNTQYTVRYS 886

  Fly   769 ----------------LLLVTGLKPDTRY-----------NLHFYNCKTRIFYGDIDEKTEQDPP 806
                            ...|.||:|.|.|           .|..::..||       .:|...||
 Worm   887 TAVDGNQHRYVNSTETWATVEGLRPATEYEFAVRAVASNGQLSTWSMATR-------NRTLAAPP 944

  Fly   807 G------TISNSKLIKQNGLKLMWEPPINPNGRVHHY-----------DIRWSL-----DNVTHE 849
            .      |:..::....:...|.|:||...||.:..|           |..|::     |.::|:
 Worm   945 SSAPRDLTVLPAESGDPHSSSLHWQPPKYSNGEIEEYLVFYTDRASLADKDWTINYVAGDKLSHQ 1009

  Fly   850 AIVKECTKCSYKFPNVSETAKIHVAV-RVMGDTGAGAPMYFDMINNNHTWLKEESESSHSEVYSG 913
             :.....|.:|.|...:...|.|... .|:|.|.:|..:......:|        ...|....||
 Worm  1010 -VSNLLPKANYFFKIQARNEKGHGPFSSVVGYTPSGGAILSGKDRHN--------ARGHGSAASG 1065

  Fly   914 IAIG------SLL-----------SIACVFLFGLFII----FQQRNFKARAQGPTHLTTPTDINF 957
            ..:.      |||           :.|.:.:..|.:|    :::.:...|..|         ...
 Worm  1066 DTVSLVDQLQSLLHSNPLYLILLAAFALILILTLILIIMCCWKRSSGGGRKNG---------YQS 1121

  Fly   958 GNLSSASGMPGDSAGGLSG--------------------------GTLQQDCHEMQTLIPRSRYH 996
            |..:||....|...|||.|                          .|......::::  |..|||
 Worm  1122 GKKTSAGAGSGGGIGGLGGPPNDLWINGTGSHMRAGASDYMVDGLATAHLTAADIES--PTPRYH 1184

  Fly   997 IELLPEHSL--EYQTSTAAV-------AVVHLANGNGSVQVARRSDQDGAAQGDLGIAGVHNLSQ 1052
             .|..:.:|  .|..|:.::       .||:  .|.|..|..:|.|.: :..|.....|..:...
 Worm  1185 -HLQGQGTLTRSYHQSSQSLEGRQRTPQVVY--TGTGRHQPIQRIDFE-SPYGSSSAIGSASTPP 1245

  Fly  1053 LPLCGVGGTSPERKTVQDAMLQEAKAFYIPYRHTPPNAVALSSSKQCAVPSGSELEVIVPP---- 1113
            ||:.......|   ||.|.        |...|.||||     ||...|:.|.::|....||    
 Worm  1246 LPMQAPPSGPP---TVIDG--------YRTLRGTPPN-----SSAANALRSFTQLAGATPPPPHS 1294

  Fly  1114 ----NSLPLV-------------TTMPGLGVVG-----GGGSGGGGVGGSSRRSGSLS------- 1149
                :|.|.:             |..|.:.|..     ...|.....|.|.::||...       
 Worm  1295 AASSSSRPTIIAAGGRQVPVGRATAQPRVNVANIYSPFASCSASSDAGESDKKSGECMEMRETTP 1359

  Fly  1150 -SSSASSSSNGSSKKQFHTNFVRHSNSND 1177
             .|:.:.||||   ::.:||.....::.|
 Worm  1360 IKSNTAGSSNG---EKMNTNMNPSHSAED 1385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_651482.3 Ig 179..245 CDD:409353 14/66 (21%)
Ig strand B 179..183 CDD:409353 0/3 (0%)
Ig strand C 192..196 CDD:409353 0/3 (0%)
Ig strand E 214..218 CDD:409353 2/3 (67%)
Ig strand F 228..233 CDD:409353 2/4 (50%)
Ig strand G 242..245 CDD:409353 0/2 (0%)
IG_like 284..356 CDD:214653 15/78 (19%)
Ig 360..443 CDD:472250 26/83 (31%)
Ig strand B 377..381 CDD:409353 1/3 (33%)
Ig strand C 390..394 CDD:409353 0/3 (0%)
Ig strand E 411..415 CDD:409353 2/3 (67%)
Ig strand F 425..430 CDD:409353 4/4 (100%)
Ig strand G 438..441 CDD:409353 1/2 (50%)
FN3 804..886 CDD:238020 23/104 (22%)
unc-40NP_491664.1 Ig 41..142 CDD:472250 22/93 (24%)
Ig strand B 59..63 CDD:409353 1/3 (33%)
Ig strand C 78..81 CDD:409353 0/2 (0%)
Ig strand E 101..105 CDD:409353 2/3 (67%)
Ig strand F 115..120 CDD:409353 2/4 (50%)
Ig strand G 137..140 CDD:409353 1/2 (50%)
Ig 149..236 CDD:472250 18/88 (20%)
Ig strand C 178..182 CDD:409353 0/3 (0%)
Ig strand E 201..205 CDD:409353 2/3 (67%)
Ig strand F 215..220 CDD:409353 2/4 (50%)
Ig strand G 229..232 CDD:409353 0/2 (0%)
Ig_3 246..319 CDD:464046 16/76 (21%)
Ig 341..422 CDD:472250 24/80 (30%)
Ig strand B 353..357 CDD:409353 1/3 (33%)
Ig strand C 367..371 CDD:409353 0/3 (0%)
Ig strand E 388..392 CDD:409353 2/3 (67%)
Ig strand F 402..407 CDD:409353 4/4 (100%)
Ig strand G 415..418 CDD:409353 1/2 (50%)
FN3 441..529 CDD:238020 20/89 (22%)
FN3 501..926 CDD:442628 75/443 (17%)
FN3 635..727 CDD:238020 25/101 (25%)
FN3 946..1038 CDD:238020 17/92 (18%)

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