DRSC/TRiP Functional Genomics Resources

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Protein Alignment plum and cdon

DIOPT Version :9

Sequence 1:NP_001163744.1 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:XP_031762020.1 Gene:cdon / 100492803 XenbaseID:XB-GENE-922837 Length:1253 Species:Xenopus tropicalis


Alignment Length:1302 Identity:242/1302 - (18%)
Similarity:413/1302 - (31%) Gaps:406/1302 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ILLLLLTDHNGRLT--LTKESTTVAAAVAQPKNSTALQPYLQIQKHAVTRLTISKPHSPYYLPCI 79
            ::|::.|..|..:|  .|.|..:....:..|                ||.|..::|         
 Frog    15 LVLVVSTSANSDVTPHFTSEPLSTVQKLGGP----------------VTLLCTAEP--------- 54

  Fly    80 PILTPYNHDQDNQPIYCSWYRNDVVVEQVSYRKNDFFIYDNGTLRLPTNEKAS-GEYYCKIEWDE 143
                |:.|        .||..|..::|::|.:..|.   .:|.|.:|:...|. |:|.|......
 Frog    55 ----PWAH--------ISWLFNGELLERISSQGVDI---QSGHLTIPSLGTAHIGQYQCIASTSV 104

  Fly   144 SAVISDRITVEYPVLKRLFPGQQQAANISALENKPLVLSCPF-LSVPAA------RFSWYFGNDS 201
            .|::|...||....|...  ......:::|.|.....:.|.. .|.|.|      |..|.    .
 Frog   105 GAILSRPATVSVAYLNDF--ETTIGHSVTAEEGSSEFIGCKIPESNPKAHVRYKVRGKWL----K 163

  Fly   202 LTNDNSALILTNGTLILRHLRLEQAGKYKCVAQNTFASKTHRQFIWQLQVEPKDATFYPKNEAGI 266
            .::.:..|||.:|.|.:.::.||..|.|:|.|.|..   ||       :::|..:|.    :..:
 Frog   164 ESSVDKYLILPSGNLHILNVSLEDRGTYRCAAYNPV---TH-------ELKPNPSTV----KLSV 214

  Fly   267 TETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVADFVP----IVWYLQPPNNKMVRLSNNSVAY 327
            ..:...::.:|......||.|.....:.|:|  |...||    :.||         :....:.||
 Frog   215 NRSPQVDSHILHPVIAQTVLVQIHDPLTLEC--VVGGVPNHSQVYWY---------KGGKEAEAY 268

  Fly   328 S--------ITNASIARHE-GRYSCITP-----LETQNFQVIVTTPPRIVSRLPVEVVYIGLSRT 378
            .        :....:.|.: |.|||:..     .:..|:.:.|..||.|..:...:.:.:|.:..
 Frog   269 GRRKLLHTHLVIEQVQRSDAGNYSCVFDNGSGVFQRVNYTLTVLEPPSISQKNEDQSLIMGSNVR 333

  Fly   379 LTCRAEGHPEPSITWYHNGVHLNSSYTRYISGNELHVHSFDSKEEGIYQCVARNVAGEDSATGEL 443
            .:|.:.|:|.|:|||:||.|.::.|....||||:|.:.:..:::.|||||.|.|..|....:..|
 Frog   334 FSCESRGNPSPNITWFHNAVQIHPSAHHQISGNKLRITNLIAEDSGIYQCFANNGVGSAQVSQRL 398

  Fly   444 RFNRQ-------------LEEVN-------------PLQNIRCY----PHSFH------------ 466
            ....:             :...|             |...||.|    |.|.|            
 Frog   399 TVKSETWSKPVIVSPPTSIRVANGDLVTLTCNATGIPTPTIRWYDSHGPISSHPSQVLRSKPRKA 463

  Fly   467 -------------SINITFDSRTLTSMFVVYIVRNNPHSWT------------------------ 494
                         .:::.......:|:::..|...:...:|                        
 Frog   464 LMSKIGNLGLHQDPVHLIMSQAGSSSLYIRAITVQHSGKYTCEATNEFGSAHADAFLTVVPYEMS 528

  Fly   495 ----SFSPMKLNQT--------SYVVISTDLPVYEPFALITRVLFPTTEVRTGTLVPQ-QMILSS 546
                ..:|:.|.|:        :.....:.|..:||.:.:|...:      :|..:|: .:|||.
 Frog   529 TKPEDITPLDLTQSDEGDYDSETRAPSHSQLNEHEPESRVTEKPY------SGASLPEAPIILSP 587

  Fly   547 LRSTPVTCCTQGLMLRPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHPAQLLNGSLQGTLT 611
            .::|...  ...||.|.   |.|       |.|....||:....::.         :|::.|...
 Frog   588 PQTTKPD--MYNLMWRS---GKD-------GGLPINAYFVRYRKLDD---------DGNMVGNWN 631

  Fly   612 SVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDD----------IFSLVVDA 666
            |:...|.:....|||::..:......|.||...|......|.....:          .|..:.|.
 Frog   632 SIRVPASENEFPLTELESSSLYEVLMVARNAAGEGQPAMLTFRTSKERSSSSKNTQAPFPPIGDN 696

  Fly   667 SVT---GILLQRFTRIKM-------------RVLIITTENEFLGQDFRYVQWKIIENG------- 708
            ..|   |:....|..:.|             |..|.|.....:     ||.|....||       
 Frog   697 KQTVIHGVSNSNFGLVPMDPSRHSGVPEAPDRPTISTASETSV-----YVTWIPRANGGSPITSF 756

  Fly   709 ------------TSEQSNMPFRLVTRES----------RALAFKFLDSLNETCVLECHTEIQAQM 751
                        |:.::..|.:|....|          |.:|.........:.|...:.......
 Frog   757 KVEYKRTGGHWNTASENIPPSKLSVEVSNLEPGGLYKFRVIAINNYGESRRSTVSRPYQVAGYSS 821

  Fly   752 SLPSQ---DPKCQDRNIA--NSLLLVTGLKPDTRYNL---HFYNCKTRIFYGDIDEKTEQD---- 804
            .||:.   .|:.......  ..:||.....|:...|.   .||     |:|...|...:.|    
 Frog   822 RLPNPLIVGPRIDQTEAVTDTQILLKWTYIPENNNNTPIQGFY-----IYYRPTDSDNDSDYKRD 881

  Fly   805 -PPGTISNSKLIKQNGLKLMWEPPINPNGRVHHYDIRWSLDN---VTHEAIVKECTKCSYKFPNV 865
             ..||       ||..|....:|..:       |||:....|   .:..:.|..|...:.:.|..
 Frog   882 MVEGT-------KQRHLISHLQPETS-------YDIKMQCFNERGASDYSNVMMCETKARRGPGA 932

  Fly   866 SETAKIHVAVRVMGDTGAGAPMYFDMINNNHTWLKEESESSHSEVYS--------GIAIGSLLSI 922
            ||...:.::...:.|                    ..|..|||...|        |..:|.::.|
 Frog   933 SEYPVLDLSTPSVPD--------------------RSSSPSHSPARSGDFLYVIVGCVLGGMVLI 977

  Fly   923 ACVFLFGLFIIFQQRNFKARAQGPTHLTTPTDINFGNLSSASGMPGDS-------AGGLSGGTLQ 980
            ...|:....:..:|:....:.:.|.:|....|:| |.:...:.:||.|       .|.:..|.|.
 Frog   978 LMAFIAMCLLKNRQQTLMQKFEPPGYLYQGADLN-GQIIEYTTLPGTSRINGSVHTGFMGNGNLN 1041

  Fly   981 QDC----HEM----------------QTLIPRSRYHIELLPEH---------SLEYQTSTAAVAV 1016
            ..|    |::                .:.:..:....|.||.|         :|.....|..:..
 Frog  1042 NGCPHIHHKVHNRASGVGNGEMYPGCNSSLKETYVDYERLPHHLSNGRVMYTALPQTDPTECINC 1106

  Fly  1017 VHLAN-------------GNG----SVQVARRSDQDGAAQGDLGIAGVHNLSQLPLCGVGGTSPE 1064
            .:..|             |||    .|.:|.:.|:        |.....|...:|:|   .|||:
 Frog  1107 RNCCNNNRCFTKPNGSYCGNGVAVMPVGMAPQQDE--------GETNPLNHVMVPMC---LTSPD 1160

  Fly  1065 RK 1066
            ::
 Frog  1161 QR 1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_001163744.1 IG_like 170..241 CDD:214653 20/77 (26%)
IGc2 175..235 CDD:197706 18/66 (27%)
IG_like 284..356 CDD:214653 18/89 (20%)
I-set 360..443 CDD:254352 27/82 (33%)
IGc2 378..435 CDD:197706 23/56 (41%)
FN3 804..886 CDD:238020 17/89 (19%)
cdonXP_031762020.1 Ig_3 29..101 CDD:404760 22/111 (20%)
Ig strand A' 37..41 CDD:409353 0/3 (0%)
Ig strand B 45..54 CDD:409353 4/24 (17%)
Ig strand C 59..63 CDD:409353 2/3 (67%)
Ig strand C' 65..68 CDD:409353 0/2 (0%)
Ig strand D 75..79 CDD:409353 1/6 (17%)
Ig strand E 81..87 CDD:409353 2/5 (40%)
Ig strand F 94..102 CDD:409353 3/7 (43%)
Ig strand G 105..116 CDD:409353 4/10 (40%)
IG_like 129..214 CDD:214653 24/102 (24%)
Ig strand B 136..143 CDD:409353 0/6 (0%)
Ig strand C 152..156 CDD:409353 0/3 (0%)
Ig strand D 172..175 CDD:409353 2/2 (100%)
Ig strand E 176..181 CDD:409353 2/4 (50%)
Ig strand F 189..197 CDD:409353 4/7 (57%)
IG 231..311 CDD:214652 18/90 (20%)
I-set 315..400 CDD:400151 28/84 (33%)
Ig strand A' 323..327 CDD:409353 0/3 (0%)
Ig strand B 331..339 CDD:409353 1/7 (14%)
Ig strand C 345..350 CDD:409353 3/4 (75%)
Ig strand C' 352..355 CDD:409353 1/2 (50%)
Ig strand D 360..364 CDD:409353 0/3 (0%)
Ig strand E 366..371 CDD:409353 2/4 (50%)
Ig strand F 380..387 CDD:409353 5/6 (83%)
Ig strand G 391..400 CDD:409353 1/8 (13%)
Ig_3 407..509 CDD:404760 11/101 (11%)
Ig strand B 425..429 CDD:409353 0/3 (0%)
Ig strand C 438..442 CDD:409353 2/3 (67%)
Ig strand E 488..492 CDD:409353 1/3 (33%)
Ig strand F 502..507 CDD:409353 1/4 (25%)
fn3 598..668 CDD:394996 20/88 (23%)
FN3 723..809 CDD:238020 14/90 (16%)
FN3 837..924 CDD:238020 22/105 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10148
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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