DRSC/TRiP Functional Genomics Resources

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Protein Alignment plum and igdcc4

DIOPT Version :10

Sequence 1:NP_651482.3 Gene:plum / 43197 FlyBaseID:FBgn0039431 Length:1298 Species:Drosophila melanogaster
Sequence 2:XP_004912739.2 Gene:igdcc4 / 100488057 XenbaseID:XB-GENE-991425 Length:1263 Species:Xenopus tropicalis


Alignment Length:1250 Identity:277/1250 - (22%)
Similarity:419/1250 - (33%) Gaps:359/1250 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LPCIP-----ILTPYNHDQD----------NQPIYCSWYRNDVVVEQVSYRKNDFFIYDNGTLRL 125
            |.|.|     :|.|   ||:          ..|...:|.::.|.:......:    :..||:|.:
 Frog    31 LSCSPGQTHTVLLP---DQEAILHCEVGSREVPYNVTWKKDGVQLNSDEALR----VLRNGSLLI 88

  Fly   126 PTNEK--ASGEYYCKIEWDESAVISDRI-TVEYPVLKRLFPGQQQAANISALENKPLVLSCPFLS 187
            ...|:  ..|.|.|..: |...:::.|. ||.   |..|....||..:.:.:.|......|.|..
 Frog    89 SQMERDNIEGRYSCAAQ-DSVGIVTGRSHTVR---LASLPSFHQQPESQTVMLNSMARFECGFSG 149

  Fly   188 VPAARFSWYFGNDSLTNDNSALILTNGTLILRHLRLEQAGKYKCVAQN----TFASKTHRQFIWQ 248
            .|....:|......:..::..|.|..|.|.:..::.:..|.|:|:..|    :::|:.|      
 Frog   150 FPPPEVTWQKDQAPVPAESRFLTLPTGVLQISGVQEKDEGFYRCMVTNILNSSYSSEAH------ 208

  Fly   249 LQVEPKDATFYPKNEAGITETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVADFVPIVWYLQ-- 311
            |.|| :||:.|         |...|..:..|.||.|  |..|.|.:::|.|..:.||:|.:::  
 Frog   209 LSVE-QDASVY---------TLAEELTITRAPQNIT--VEEGHSAIMECMAKGNIVPLVSWIRED 261

  Fly   312 -PPNNKMVRLSNNSVAYSITNASIAR----HEGRYSC-ITPLETQNF-----------QVIVTTP 359
             .|.:..|:|...      ||..:.:    |.|.|.| .....|::|           ..|:|.|
 Frog   262 GKPISSDVKLLGE------TNLLVPQAQPPHAGVYVCRANKPHTRHFITATAQLHILVHPIITQP 320

  Fly   360 PRIVSRLPVEVVYIGLSRTLTCRAEGHPEPSITWYHNGVH-LNSSYTRYISGNELHVHSFDSKEE 423
            |..::|     ...|.:| ..|||||.|||:|.|..||.. |::...|......|.:.....::.
 Frog   321 PETITR-----ARAGTAR-FVCRAEGEPEPTIHWLKNGQPLLSNGRVRIQPRGSLVITQLALEDV 379

  Fly   424 GIYQCVARNVAGEDSATGELRFNRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRN 488
            |.|||:|.|..|...||.:|....|.....|.|.::.         :|..||::|      :...
 Frog   380 GYYQCLAENSVGSACATAKLYVTVQDGLPGPPQAVKA---------VTVSSRSVT------VGWE 429

  Fly   489 NPHS-WTSFSPMKLNQTSYVVISTDLPVYEPFA-------LITRVLFPTTEVRTGTLVPQQMILS 545
            .|.| |.......|:.|.  ...:|...|: ||       |..|.|.|.|:.....:...|...|
 Frog   430 QPESNWERVIGFSLHYTK--TGGSDNMEYQ-FAVNNDTTELYVRDLEPGTKYTFYVVAYSQQGAS 491

  Fly   546 SLRSTPVTCCTQGLMLRPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHP--AQLLNGSL-- 606
            | .|.||...|  |...|.|..:......|..||             |....|  .:|.||.:  
 Frog   492 S-ASPPVVIKT--LDEVPAAAPSLNLHNHSPSQL-------------HVSWQPLLPELSNGQIIK 540

  Fly   607 ----QGT-----LTSVEEKADQVRHHLTEIQ-------PLNQSAAA-------TVLRNVEHEDNV 648
                .||     .:|||...::.:..|..:|       .::.|.||       .||......||.
 Frog   541 YRIEYGTQKDDNFSSVEVLGNETQAILMPVQLNSLYKVRISASTAAGYGLPSHWVLHRTPDRDNQ 605

  Fly   649 VD-------------DTLELEDDI-------------FSLVVDASVTGILLQR------FTRIKM 681
            ..             |:|.|..::             :.|:..|...|...|:      .|.||:
 Frog   606 TQAPSQMQLKVTPRTDSLSLSWELPYGEFPVSSFRLYYRLICPALAFGGSCQQQGERWDGTPIKL 670

  Fly   682 R-------------------VLIITTENEFLGQDFRYVQWKIIENGTSEQSNM-----------P 716
            :                   .|:...:|    |:.:.|.||    |.::|.:.           |
 Frog   671 KKKRRQYEITQLMPGQLYQVKLVALNKN----QEGQTVTWK----GRTKQISSIAQVPPAQRIPP 727

  Fly   717 F------------RLVTRESRALAFKFLDSLNETCVLECHTEIQAQMSLPSQDPKCQDRNIANSL 769
            |            ..|....|..||.....:|.|  :.|........||.:.      ...|:..
 Frog   728 FPPSHIEVEPNGSTSVWVRWRRPAFITSKIVNYT--VRCGPWGATNASLMTY------HGSASEE 784

  Fly   770 LLVTGLKPDTRYNLHFYNCKTRIF----YGDIDEK-----TEQDPPGTISNSKLIKQNGLKLMWE 825
            :||.||||.|:|  .|......:|    |.||.||     ....||..:....| .|..::|.|.
 Frog   785 ILVAGLKPYTKY--EFQVRSNGVFVDGPYSDIVEKMTLPDRPSSPPADLVLQPL-SQFSVQLHWR 846

  Fly   826 PPINPNGRVHHYDIRWSLDN---------VTHEAIVKECTKCSYKFPNVSETAKIHVAVRVMGDT 881
            ||:..||.:..|.|.::.::         :|.|.             |:..|       .|.| .
 Frog   847 PPVESNGIIAQYLIMYTTNSSHPDEMWTFLTREG-------------NIFST-------EVQG-L 890

  Fly   882 GAGAPMYFDM-INNNHTW--------LKEESESSHSEV-----YSGIAIGSLLSIACVFLFGLFI 932
            .:||..||.| ......|        ::....:..::|     .:||.:|..|.:.|:.|. :..
 Frog   891 QSGAKYYFKMGAKTVSGWGPYTSALVVETLPPTPSADVLDMNSVTGIIVGVCLCLLCLLLC-MCA 954

  Fly   933 IFQQRNFKARAQ-GPTHLTTPTDINFGNLSSASGMPGDSAGGLSGGTLQQDCHEMQTLIPRSRYH 996
            .|||...:..:. |......||........|.|...|            ||.||::||:|..:..
 Frog   955 SFQQGKQRDSSDIGSRSSRVPTSYQRARQGSCSQGHG------------QDSHELETLMPSQQED 1007

  Fly   997 IELLP---------------------EHSLEYQTSTAAVAVVHLANGNGSVQVARRSDQDGAAQG 1040
            ...||                     ::.|:.:.|.......:.||...|...:...|...||.|
 Frog  1008 TPSLPVPEATNLIVGQSVVTASQPEEKNPLKMKPSWNGSVTQNWANHITSYTESITGDLSSAANG 1072

  Fly  1041 DLGIAGVHNLSQLPLCGVGGTSPERKTVQDAMLQEAKA-FYIPYRHTPPNAV-----------AL 1093
            ...          ||.. ||.   |.|:.|...:..|. ....:|:|..|.|           |.
 Frog  1073 PAN----------PLSS-GGI---RMTLNDFSYEPLKVDIGRSHRNTSQNQVEADVIVHSDFSAS 1123

  Fly  1094 SSSKQCAVPSGSELE 1108
            ..|..||.....|.|
 Frog  1124 ERSGHCAGLDSEEEE 1138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plumNP_651482.3 Ig 179..245 CDD:409353 14/69 (20%)
Ig strand B 179..183 CDD:409353 0/3 (0%)
Ig strand C 192..196 CDD:409353 0/3 (0%)
Ig strand E 214..218 CDD:409353 2/3 (67%)
Ig strand F 228..233 CDD:409353 2/4 (50%)
Ig strand G 242..245 CDD:409353 1/2 (50%)
IG_like 284..356 CDD:214653 20/90 (22%)
Ig 360..443 CDD:472250 28/83 (34%)
Ig strand B 377..381 CDD:409353 1/3 (33%)
Ig strand C 390..394 CDD:409353 1/3 (33%)
Ig strand E 411..415 CDD:409353 1/3 (33%)
Ig strand F 425..430 CDD:409353 3/4 (75%)
Ig strand G 438..441 CDD:409353 1/2 (50%)
FN3 804..886 CDD:238020 19/90 (21%)
igdcc4XP_004912739.2 Ig 40..120 CDD:472250 18/90 (20%)
Ig strand B 48..52 CDD:409389 0/3 (0%)
Ig strand C 62..66 CDD:409389 0/3 (0%)
Ig strand E 84..88 CDD:409389 2/3 (67%)
Ig strand F 99..104 CDD:409389 2/4 (50%)
Ig strand G 115..118 CDD:409389 0/2 (0%)
I-set 124..211 CDD:400151 18/92 (20%)
Ig strand B 141..145 CDD:409549 0/3 (0%)
Ig strand C 154..158 CDD:409549 0/3 (0%)
Ig strand E 176..180 CDD:409549 2/3 (67%)
Ig strand F 190..195 CDD:409549 2/4 (50%)
Ig 226..311 CDD:472250 23/92 (25%)
Ig strand B 241..245 CDD:409367 0/3 (0%)
Ig strand C 254..259 CDD:409367 1/4 (25%)
Ig strand E 275..279 CDD:409367 2/3 (67%)
Ig strand F 289..294 CDD:409367 2/4 (50%)
Ig strand G 304..307 CDD:409367 0/2 (0%)
I-set 315..401 CDD:400151 32/91 (35%)
Ig strand B 333..336 CDD:409353 1/3 (33%)
Ig strand C 345..349 CDD:409353 1/3 (33%)
Ig strand E 367..371 CDD:409353 1/3 (33%)
FN3 <381..>587 CDD:442628 57/239 (24%)
Ig strand F 381..386 CDD:409353 3/4 (75%)
Ig strand G 394..397 CDD:409353 1/2 (50%)
FN3 614..701 CDD:214495 13/90 (14%)
FN3 727..816 CDD:238020 25/98 (26%)
FN3 826..919 CDD:238020 24/114 (21%)

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