DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5455 and serac1

DIOPT Version :9

Sequence 1:NP_651481.1 Gene:CG5455 / 43196 FlyBaseID:FBgn0039430 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_031758164.1 Gene:serac1 / 101730273 XenbaseID:XB-GENE-6041738 Length:657 Species:Xenopus tropicalis


Alignment Length:668 Identity:148/668 - (22%)
Similarity:238/668 - (35%) Gaps:253/668 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LQEIDEHYVCDIAMMRIGGEESLPVTH-NEPVDESPPLAHNESTNNENEVE----------IDRQ 109
            |.::|::|..:..:.::  ..|||.|. ::.|.....||..||:.:..:..          :...
 Frog   199 LPKVDDNYSIEYGLRQL--LSSLPQTELDQCVKYLTSLALRESSQSIADQRRGLWCFGGNGLPYA 261

  Fly   110 EEEQAV-SDLVRSSSAGALMEADSKNGGSMRVVFG----ILVRLVLPLANGVARGIKGIRDVRVL 169
            |...:| |:.|..||..||::........:::|.|    :|.|:.|     :.:..:.|:.. ::
 Frog   262 ESLSSVPSEKVELSSLQALLKHSKIPTHCVKIVSGGGLQLLQRIYL-----LRKDAQKIQRT-IV 320

  Fly   170 RVLQNLASSRQALTNLVAFAANTISLNLSSVQVSNRMGPLLKLLKMRKSQDGLESLPDTLSAPST 234
            |::.|||                :..||.|..|.:...|:|                        
 Frog   321 RIIGNLA----------------LHENLHSEIVDSGWIPIL------------------------ 345

  Fly   235 PCTPCPTSNPMQGPPFYTVRSD-----APNCCTINILAEPPPG-----------QPIRADIVLIH 283
                   :..|:.|  |.::|.     ..|....::..:.|.|           |||||||:.||
 Frog   346 -------AEAMKSP--YVIQSSHAARVLANLDRDSVNEKYPDGIYVLHPQYRSSQPIRADILFIH 401

  Fly   284 GLHGSLVNTWKQGLWQNDRQPVEFERPPRPPVRPPKRPRHSRSAAIHPAPREKRAKFASLNRCMD 348
            ||.|:...||:    |.||                                              
 Frog   402 GLLGAAFKTWR----QQDR---------------------------------------------- 416

  Fly   349 TPDDSPVRRRTRLQKSMPMQPEDFQINASDSDDSDYAYVCGEPEEIQICEGIEYSFPTFRLRMQD 413
               |.|:                        |:|                               
 Frog   417 ---DEPL------------------------DES------------------------------- 423

  Fly   414 NSRLLQAELESMLQANGNEEGGTNGKDNRPRPPSPATPRKAARKSKPSPNDPNYSKCWPGDWLPL 478
                  |.||.                                         :|::|||..||..
 Frog   424 ------AALED-----------------------------------------DYTECWPKSWLAT 441

  Fly   479 DCPGVRVIALNYTTDQYLWRPLWKSKEPRSSLIQRSREMAELLIQHRVGHGRPIIYVGHSKGGLF 543
            |.|.:|::::.|.|....|:....:...|.||..|||.:.:.|....||. ||||:|.||.|||.
 Frog   442 DSPDLRILSIEYDTQLSDWKARCPADNNRKSLDYRSRNLLKKLKAAGVGE-RPIIWVSHSMGGLL 505

  Fly   544 IKQLMVDAWESGRPAMTPLWRSARGCFFYSVPHRGSHLA--SIKAP-LLSRSVELLEIEKNNKYL 605
            :|::::.|  |....|..|..:.:|..||||||.||.||  ||.|. ||..|:|:.|:..::..|
 Frog   506 VKKMLLKA--SQDEDMKDLVNNTKGVAFYSVPHHGSQLAEYSISARLLLFPSIEVKELSTDSPEL 568

  Fly   606 LDLHRRFAGLYHLGHLKIEVFSFVETALTLMS-VLYLRIVGVDSADPGIGDVCGIRLDHREICKP 669
            ..|:..|  |....:...::.||.|...|.:. ::.|.||.::|||.|||.:..:.::|..||||
 Frog   569 KKLNDEF--LQFSKNKDFKIISFAELLPTRVGRMMKLHIVPLESADLGIGKLIPVDVNHLNICKP 631

  Fly   670 RGRDCILYKELVKMIEKV 687
            :.:|..:|:..::.|..|
 Frog   632 KSKDSFIYQCTLQFIHDV 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5455NP_651481.1 None
serac1XP_031758164.1 armadillo repeat 258..283 CDD:293788 8/24 (33%)
armadillo repeat 291..328 CDD:293788 10/58 (17%)
armadillo repeat 334..367 CDD:293788 8/65 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1311762at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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