DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5447 and SHR5

DIOPT Version :9

Sequence 1:NP_001262986.1 Gene:CG5447 / 43192 FlyBaseID:FBgn0039427 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_014531.1 Gene:SHR5 / 854039 SGDID:S000005470 Length:237 Species:Saccharomyces cerevisiae


Alignment Length:144 Identity:31/144 - (21%)
Similarity:50/144 - (34%) Gaps:42/144 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PTALQATGGG--VVFSKVFIQRDYSEGTS----VKFHTRLPAELEGMIERHVFEATINRLNEFYA 72
            |....|.|..  .|...|.:.|.:.|..|    .:|.|:||......|                 
Yeast    56 PNVYAARGSAEFQVTRVVRVPRRFDESRSSLETPQFSTQLPGSEPAAI----------------- 103

  Fly    73 EAEEGS----CGTYCEG--CIGC-----ITAYLIYMCSETHYEKTLRKISKFVASQNERIY---N 123
            ..::|:    ||.|..|  ..||     ::.||    |.....:.:.:::.|:..:...::   |
Yeast   104 VGDDGTSFVRCGRYDIGDHVFGCSSVSPLSEYL----SAAELAEVVHRVNGFLLREEGEVFGWRN 164

  Fly   124 TKGLQLIDPTYRGL 137
            ..|| |:|....||
Yeast   165 LSGL-LLDMLTGGL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5447NP_001262986.1 Erf4 29..141 CDD:287258 27/127 (21%)
SHR5NP_014531.1 Erf4 116..230 CDD:402047 15/67 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13254
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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