DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Msgn1

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001103021.1 Gene:Msgn1 / 689864 RGDID:1587516 Length:187 Species:Rattus norvegicus


Alignment Length:125 Identity:41/125 - (32%)
Similarity:60/125 - (48%) Gaps:25/125 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DGESANLADFQLELD-------PI---AEPASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRM 107
            ||.|::.|...:|||       |.   |....|.:|.:..|       :|..||:.|:.||:.||
  Rat    74 DGYSSHEAGGLVELDYSMLAFQPSYIHAAGGLKGQKGSKVK-------MSVQRRRKASEREKLRM 131

  Fly   108 REINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTDSI---RDPSYES 164
            |.:..|..|||:.:|...     :...:.||||.||:..:|||..|||.:   |:|..:|
  Rat   132 RTLADALHTLRNYLPPVY-----SQRGQPLTKIQTLKYTIKYIRELTDLLNGGREPRPQS 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 25/61 (41%)
Msgn1NP_001103021.1 bHLH_TS_Msgn1 112..177 CDD:381509 27/76 (36%)

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