DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and myf5

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_571651.1 Gene:myf5 / 58097 ZFINID:ZDB-GENE-000616-6 Length:237 Species:Danio rerio


Alignment Length:191 Identity:54/191 - (28%)
Similarity:88/191 - (46%) Gaps:32/191 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 KTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKY 149
            |.||..:.  ||:.|..|||.|::::|.|||.||.|.        :||.:::|.|:..||.|::|
Zfish    60 KRKASTVD--RRRAATMRERRRLKKVNHAFEALRRCT--------SANPSQRLPKVEILRNAIQY 114

  Fly   150 ITMLTDSIRD--PSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSS 212
            |..|.:.:|:  ..|.|      |...::.|......:..|:.|:...||..:..:..|:.....
Zfish   115 IESLQELLREQVEQYYS------LPMESSSEPASPSSSCSESMVDCNSPVWPQMNQNYGNSYNFD 173

  Fly   213 AASKRQSQKQAKIVPQIPPISSGESCYAT-----SSIGSPASSAYASLSSSSNSHSSSSSP 268
            |       :.|..:.:.|.:||.: |.::     ||: .||......:.|.:.|.|.||||
Zfish   174 A-------QNASTMERTPGVSSLQ-CLSSIVDRLSSV-DPAGMRNMVVLSPTGSDSQSSSP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 23/58 (40%)
myf5NP_571651.1 BASIC 4..72 CDD:128794 5/13 (38%)
HLH 68..119 CDD:278439 23/58 (40%)
Myf5 <151..199 CDD:289036 10/55 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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