DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Ascl3

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_064435.1 Gene:Ascl3 / 56787 MGIID:1928820 Length:174 Species:Mus musculus


Alignment Length:86 Identity:29/86 - (33%)
Similarity:43/86 - (50%) Gaps:19/86 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PLSKYRR----------KTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLR 144
            |.:.|||          :..|.|||.|::.:|..:..||..:||..       ..::|:|:.|||
Mouse    78 PYTNYRRCDYTYGPAFIRKRNERERQRVKCVNEGYARLRRHLPEDY-------LEKRLSKVETLR 135

  Fly   145 LAMKYITMLTDSIRDPSYESE 165
            .|:|||:.| .|:..|. |||
Mouse   136 AAIKYISYL-QSLLYPD-ESE 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 21/68 (31%)
Ascl3NP_064435.1 HLH 95..145 CDD:278439 20/57 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..174 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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