DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Msgn1

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_062417.1 Gene:Msgn1 / 56184 MGIID:1860483 Length:188 Species:Mus musculus


Alignment Length:126 Identity:41/126 - (32%)
Similarity:59/126 - (46%) Gaps:26/126 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DGESANLADFQLELD--------PIAEPAS--KSRKNAPTKSKTKAPPLSKYRRKTANARERTRM 107
            ||..::.|...:|||        |....|.  |.:|.:..|       :|..||:.|:.||:.||
Mouse    74 DGYGSHEAAGLVELDYSMLAFQPPYLHTAGGLKGQKGSKVK-------MSVQRRRKASEREKLRM 131

  Fly   108 REINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTD----SIRDPSYES 164
            |.:..|..|||:.:|...     :...:.||||.||:..:|||..|||    |.|:|..:|
Mouse   132 RTLADALHTLRNYLPPVY-----SQRGQPLTKIQTLKYTIKYIGELTDLLNSSGREPRPQS 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 22/58 (38%)
Msgn1NP_062417.1 HLH 119..173 CDD:278439 22/58 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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