DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Bhlhe23

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001102681.1 Gene:Bhlhe23 / 499952 RGDID:1559760 Length:223 Species:Rattus norvegicus


Alignment Length:246 Identity:62/246 - (25%)
Similarity:84/246 - (34%) Gaps:86/246 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPAS---------------------- 74
            |:|||.:.:       ||....|...:|.         |.|||                      
  Rat    27 AAARGPETT-------RGFGASGPGGDLP---------AAPASRVPAATVESSGEQSGDEDEAFE 75

  Fly    75 -KSRKNAP--TKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEK 136
             :.|:..|  .....:.|...:..|.:.|||||.||.::|.|.:.||..:|.|     .:.:..|
  Rat    76 RRRRRRGPGVAVDARRRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYA-----HSPSVRK 135

  Fly   137 LTKITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKP 201
            |:||.||.||..||.|.              .:.|||...      |.|.......|..|||..|
  Rat   136 LSKIATLLLAKNYILMQ--------------AQALEEMRR------LVAYLNQGQSLAAPVAAAP 180

  Fly   202 AKTKGSGKKSSAASKRQSQKQAKIVPQIPPISSG---ESCYATSSIGSPAS 249
            ....|               ||.:.|.....:.|   :.| ||.| |||::
  Rat   181 LTPFG---------------QAAVYPFTAGAALGPCPDKC-ATFS-GSPSA 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 25/58 (43%)
Bhlhe23NP_001102681.1 bHLH_TS_bHLHe22_bHLHb5 99..168 CDD:381524 30/93 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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