DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and atoh1b

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001122151.1 Gene:atoh1b / 493915 ZFINID:ZDB-GENE-041201-1 Length:206 Species:Danio rerio


Alignment Length:148 Identity:41/148 - (27%)
Similarity:62/148 - (41%) Gaps:47/148 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LHNYADLNDMARATDSKDSRKRKTASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEP 72
            :.|||                |..|.:..|||.    ...:.::||..:.:.          |.|
Zfish    47 VENYA----------------RTAADSPMEKYI----SSPQAASEDHHAGSK----------ARP 81

  Fly    73 ASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKL 137
            .||:..:.|          .::||..||||||.||..:|.||:.||..:|       :....:||
Zfish    82 GSKASVSGP----------QRHRRVAANARERRRMHGLNRAFDKLRSVIP-------SLENEKKL 129

  Fly   138 TKITTLRLAMKYITMLTD 155
            :|..||::|..|||.|::
Zfish   130 SKYDTLQMAQIYITELSE 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 25/58 (43%)
atoh1bNP_001122151.1 HLH 92..150 CDD:238036 26/63 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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