DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and Bhlhe22

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001102410.1 Gene:Bhlhe22 / 365748 RGDID:1305451 Length:352 Species:Rattus norvegicus


Alignment Length:171 Identity:51/171 - (29%)
Similarity:70/171 - (40%) Gaps:24/171 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PIAEPASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAAN 132
            |...|.|.|..|....|..|:.. .|..|...|||||.||.::|.|.:.||..:|.|     .:.
  Rat   188 PPGGPTSGSGGNGGGGSSKKSKE-QKALRLNINARERRRMHDLNDALDELRAVIPYA-----HSP 246

  Fly   133 TNEKLTKITTLRLAMKYITMLTDSIRDPSYESEFIGE-------CLEESANREARV-----DLEA 185
            :..||:||.||.||..||.|...::.:......::.:       .|..||...|..     .|.|
  Rat   247 SVRKLSKIATLLLAKNYILMQAQALEEMRRLVAYLNQGQAISAASLPSSAAAAAAAAALHPALGA 311

  Fly   186 NEEA-----EVELPVPVAKKPAKTKGSGKKSSAASKRQSQK 221
            .|:|     ...|| |.|..|.|.......||:..|:.::|
  Rat   312 YEQAAGYPFSAGLP-PAASCPEKCALFNSVSSSLCKQCTEK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 25/58 (43%)
Bhlhe22NP_001102410.1 HLH 219..273 CDD:197674 24/58 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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