DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and Oli

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster


Alignment Length:143 Identity:44/143 - (30%)
Similarity:63/143 - (44%) Gaps:22/143 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 ASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKL 137
            ||.|..|: .|.|.:.   .|..|...|||||.||.::|.|.:.||..:|.|     .:.:..||
  Fly   111 ASGSGSNS-GKQKNRQ---GKTVRLNINARERRRMHDLNDALDELRSVIPYA-----HSPSVRKL 166

  Fly   138 TKITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPA 202
            :||.||.||..||.|..:::.:......:|     :|....|.:||.|...|        ||..|
  Fly   167 SKIATLLLAKNYILMQQNALEELRRLLAYI-----QSTTGAAPLDLGAFPAA--------AKLQA 218

  Fly   203 KTKGSGKKSSAAS 215
            ..:|...:...:|
  Fly   219 LLQGPHNEPPTSS 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 25/58 (43%)
OliNP_001188830.1 HLH 134..188 CDD:197674 24/58 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19290
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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