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Protein Alignment tx and olig2
DIOPT Version :9
Sequence 1: | NP_001287543.1 |
Gene: | tx / 43190 |
FlyBaseID: | FBgn0263118 |
Length: | 384 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_835201.1 |
Gene: | olig2 / 325288 |
ZFINID: | ZDB-GENE-030131-4013 |
Length: | 273 |
Species: | Danio rerio |
Alignment Length: | 151 |
Identity: | 43/151 - (28%) |
Similarity: | 64/151 - (42%) |
Gaps: | 23/151 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 DSKDSR-KRKTASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPASKSRKNAPTKSK 85
||..|| ..:.:|..|:...|...::..|. |..::..|.:..|....|.....::..:..
Zfish 2 DSDTSRVSSRPSSPEGDDLFLSAVKKSVGF-----SGAVSSTQSDSPPELRGADMRGISSAEEDS 61
Fly 86 TKAPPLSKYRRK------------TANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLT 138
.....|||..|| ..|:|||.||.::|.|.:.||..:|.| .|... .||:
Zfish 62 MALKMLSKKDRKLLSENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYA-HGPSV----RKLS 121
Fly 139 KITTLRLAMKYITMLTDSIRD 159
||.||.||..||.||::|:.:
Zfish 122 KIATLLLARNYILMLSNSLEE 142
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tx | NP_001287543.1 |
HLH |
95..154 |
CDD:278439 |
26/70 (37%) |
olig2 | NP_835201.1 |
HLH |
88..142 |
CDD:197674 |
26/58 (45%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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