DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and ascl1b

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_571306.1 Gene:ascl1b / 30478 ZFINID:ZDB-GENE-980526-174 Length:195 Species:Danio rerio


Alignment Length:177 Identity:41/177 - (23%)
Similarity:71/177 - (40%) Gaps:53/177 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ESANLADFQLELDPIAEPASKSRKNAPTKSK------TKAPPLSKYRRKTA-------------- 99
            |:..:|..||..|...:|.|:|.:....:.|      :.:|.|.:.:|:..              
Zfish     2 EATVVATTQLTQDSFYQPFSESLEKQDRECKVLKRQRSSSPELLRCKRRLTFNGLGYTIPQQQPM 66

  Fly   100 -----NARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYI--------- 150
                 |.|||.|::::|..|:|||..||...       .|:|::|:.|||.|::||         
Zfish    67 AVARRNERERNRVKQVNMGFQTLRQHVPNGA-------ANKKMSKVETLRSAVEYIRALQQLLDE 124

  Fly   151 -----TMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVE 192
                 .:|...:..||..:.:       ||..|:.....:::|...|
Zfish   125 HDAVSAVLQCGVPSPSVSNAY-------SAGPESPHSAYSSDEGSYE 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 23/94 (24%)
ascl1bNP_571306.1 bHLH_SF 63..133 CDD:469605 21/76 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..164 4/29 (14%)

Return to query results.
Submit another query.