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Protein Alignment tx and hlh-16
DIOPT Version :9
Sequence 1: | NP_001287543.1 |
Gene: | tx / 43190 |
FlyBaseID: | FBgn0263118 |
Length: | 384 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_492372.2 |
Gene: | hlh-16 / 183973 |
WormBaseID: | WBGene00001960 |
Length: | 146 |
Species: | Caenorhabditis elegans |
Alignment Length: | 161 |
Identity: | 44/161 - (27%) |
Similarity: | 66/161 - (40%) |
Gaps: | 46/161 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 65 ELDPIAEPASKSRKNAPTKSKTKAPPLSKYR----RKTANARERTRMREINTAFETLRHCVPEAI 125
|.:|... ||.:....:.|...|::.. |.:.|:|||.||.|:|..|||||.|:|.
Worm 12 EFEPYVR-----RKRSEAGGRKKMQGLNEQEQNLLRNSINSRERRRMHELNDEFETLRECLPY-- 69
Fly 126 KGEDAANTNEKLTKITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAE 190
.:.|| :.:::|..||.||..:|..|.: ||.:.:
Worm 70 --PNEAN-SRRMSKANTLLLASNWIKQLAN-----------------------------ANHKLQ 102
Fly 191 VELPVPVAKKPA---KTKGSGKKSSAASKRQ 218
:||.:..||..: :.|...|.||..||.|
Worm 103 MELNMANAKIDSLMVQLKKVEKPSSKCSKCQ 133
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tx | NP_001287543.1 |
HLH |
95..154 |
CDD:278439 |
24/62 (39%) |
hlh-16 | NP_492372.2 |
bHLH_TS |
42..96 |
CDD:381396 |
25/58 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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