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Protein Alignment tx and hlh-12
DIOPT Version :9
Sequence 1: | NP_001287543.1 |
Gene: | tx / 43190 |
FlyBaseID: | FBgn0263118 |
Length: | 384 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_501445.1 |
Gene: | hlh-12 / 182980 |
WormBaseID: | WBGene00001956 |
Length: | 150 |
Species: | Caenorhabditis elegans |
Alignment Length: | 161 |
Identity: | 37/161 - (22%) |
Similarity: | 66/161 - (40%) |
Gaps: | 40/161 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 KTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKY 149
|.:...|:..||..||.|||.|:.|:|..|:.|.:.:| .::...:|:::..||.|..|
Worm 4 KPRVTKLNTDRRSRANERERQRVSEMNGMFDVLLNLLP-------PSHFKTRLSRVQILREATSY 61
Fly 150 ITMLTDSIRDPS---------YESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAKTK 205
|..|.:.:.:.| :...|.| |..:|::| .::|.|.|
Worm 62 IIRLHNFLIESSNSDIDAITVFPHIFNG---ERKSNKDA------------------IRRPMKLK 105
Fly 206 GSGKKSSAASKRQ---SQKQAKIVPQIPPIS 233
..|..::..|:.: .|....::|.:.|.|
Worm 106 QGGGVAAFISRHELPPLQLPNPVIPILKPTS 136
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tx | NP_001287543.1 |
HLH |
95..154 |
CDD:278439 |
19/58 (33%) |
hlh-12 | NP_501445.1 |
HLH |
15..66 |
CDD:365806 |
18/57 (32%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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