DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Mesp1

DIOPT Version :9

Sequence 1:NP_001287543.1 Gene:tx / 43190 FlyBaseID:FBgn0263118 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_032614.2 Gene:Mesp1 / 17292 MGIID:107785 Length:243 Species:Mus musculus


Alignment Length:98 Identity:35/98 - (35%)
Similarity:51/98 - (52%) Gaps:14/98 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PIAEPASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAAN 132
            |.|.||  .|...|.:..|....|...:|::|:.||:.|||.:..|...||..:|.::     |.
Mouse    52 PCARPA--RRAGTPGRRGTHGSRLGSGQRQSASEREKLRMRTLARALHELRRFLPPSV-----AP 109

  Fly   133 TNEKLTKITTLRLAMKYITMLT-------DSIR 158
            |.:.||||.|||||::||..|:       |::|
Mouse   110 TGQNLTKIETLRLAIRYIGHLSAVLGLSEDNLR 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_001287543.1 HLH 95..154 CDD:278439 24/58 (41%)
Mesp1NP_032614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..86 11/35 (31%)
HLH 77..130 CDD:278439 24/57 (42%)
CPLCP 153..157
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..228
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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