DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and Ascl2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_032580.2 Gene:Ascl2 / 17173 MGIID:96920 Length:263 Species:Mus musculus


Alignment Length:271 Identity:63/271 - (23%)
Similarity:91/271 - (33%) Gaps:115/271 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLT 138
            |:.|::..|::.:.:..:::     .|.|||.|::.:|..|:.||..||.       ...|:||:
Mouse   103 SRRRRSGATEASSSSAAVAR-----RNERERNRVKLVNLGFQALRQHVPH-------GGANKKLS 155

  Fly   139 KITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAK 203
            |:.|||.|::||..|...:             .|..|.|.|...                     
Mouse   156 KVETLRSAVEYIRALQRLL-------------AEHDAVRAALAG--------------------- 186

  Fly   204 TKGSGKKSSAASKRQSQKQAKIVPQIPPISSGESCYATSSIGSPASSAYASLSSSSNSHSSSSSP 268
                               ..:.|..||   .:.|...|:  ||||   ||||.:    |:|.||
Mouse   187 -------------------GLLTPATPP---SDECAQPSA--SPAS---ASLSCA----STSPSP 220

  Fly   269 GLELDSLVGLNGISALDSLLLDTSDGDSLSCLSPGYGSLLTGSGESLLPGCRGDLPMSGLEKSDV 333
                                      |.|.|..|........|.||   .|.|:|  |.:|:   
Mouse   221 --------------------------DRLGCSEPTSPRSAYSSEES---SCEGEL--SPMEQ--- 251

  Fly   334 ELSLRLLDQSS 344
                .|||.||
Mouse   252 ----ELLDFSS 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 22/61 (36%)
Ascl2NP_032580.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..126 3/26 (12%)
bHLH_TS_ASCL2_Mash2 128..180 CDD:381586 20/71 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..248 26/96 (27%)

Return to query results.
Submit another query.