DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and Hand

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_061498371.1 Gene:Hand / 1274534 VectorBaseID:AGAMI1_009779 Length:384 Species:Anopheles gambiae


Alignment Length:163 Identity:48/163 - (29%)
Similarity:75/163 - (46%) Gaps:29/163 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LDPIAEPASKSRKN----APTKS---KTKAPPLSKY--RRKTANARERTRMREINTAFETLRHCV 121
            :||::..|...:::    ||:.|   .....|:.:.  ||.|||.:||.|.:.||:|:.:||..:
Mosquito   211 VDPVSGTAGNEQQSHLHMAPSSSGVLSGNGVPVVRVVKRRNTANKKERRRTQSINSAYTSLRDRI 275

  Fly   122 PEAIKGEDAANTNEKLTKITTLRLAMKYITML---TDSIRDPS--YESEFIGECLEESANREARV 181
            |.       ...:.||:||.|||||:.||..|   .:..:|||  :.:|.:....:.:|.|.|:.
Mosquito   276 PN-------VPNDTKLSKIKTLRLAISYIAHLLAVVNGNQDPSCDFRAELVPSSRKINAERRAQK 333

  Fly   182 DLEANEEAE--------VELPVPVAKKPAKTKG 206
            .|..|..|.        .....||..:..|.||
Mosquito   334 SLMQNFTANGTATSTTATNPSPPVTTEGRKIKG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 26/64 (41%)
HandXP_061498371.1 None

Return to query results.
Submit another query.