DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Ptf1a

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_446416.1 Gene:Ptf1a / 117034 RGDID:621709 Length:326 Species:Rattus norvegicus


Alignment Length:175 Identity:48/175 - (27%)
Similarity:80/175 - (45%) Gaps:25/175 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AEPASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTN 134
            |..|:.:|:....:|:.:...|    |:.||.|||.||:.||.|||.||..:|       .....
  Rat   142 AAAAAAARRRRRVRSEAELQQL----RQAANVRERRRMQSINDAFEGLRSHIP-------TLPYE 195

  Fly   135 EKLTKITTLRLAMKYITMLTDSIR-DPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVA 198
            ::|:|:.|||||:.||..|::.:: |........|.|.....:|....|...|:..:|.:.....
  Rat   196 KRLSKVDTLRLAIGYINFLSELVQADLPLRGSGTGGCGGPGGSRHLGGDSPGNQAQKVIICHRGT 260

  Fly   199 KKPAKTKG-------SGKKSSAASKRQSQKQ-----AKI-VPQIP 230
            :.|:.:..       :|...|.|.::|.::|     ||: .|:.|
  Rat   261 RSPSPSDPDYGLPPLAGHSLSWADEKQLKEQNIIRTAKVWTPEDP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 26/61 (43%)
Ptf1aNP_446416.1 bHLH_TS_PTF1A 164..218 CDD:381423 26/60 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..249 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..326 1/2 (50%)

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