DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MMP10 and Mmp2

DIOPT Version :10

Sequence 1:NP_002416.1 Gene:MMP10 / 4319 HGNCID:7156 Length:476 Species:Homo sapiens
Sequence 2:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster


Alignment Length:679 Identity:178/679 - (26%)
Similarity:256/679 - (37%) Gaps:249/679 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    30 NKDLAQQYLEKYYNLEK-DVKQFRRKDSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGV 93
            ::|:...||.::..|.| |::....:..:.:.:.|:.:|.|..:.|||::|:.|..:::||||||
  Fly    46 SEDIMYNYLMQFDYLPKSDLETGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGV 110

Human    94 PDVGHFSSF--------------------PGMPKWRKTHLTYRIVNYT-PDLPRDAVDSAIEKAL 137
            .|.....||                    .| |||.:|.||:.:||.: ||..:  |:..::.||
  Fly   111 GDRRSADSFSPDNLYHEIGSNVRVRRFALQG-PKWSRTDLTWSMVNRSMPDASK--VERMVQTAL 172

Human   138 KVWEEVTPLTFSRLYEGEADIMISFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKW 202
            .||...:.|||..:|..:|||.|.||.:.|||.|.|||||..||||:.||.|..||.|||.||.|
  Fly   173 DVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETW 237

Human   203 -----TEDASGTNLFLVAAHELGHSLGLFHSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLY 262
                 ::|:.|||...||.|||||||||.|||..:|:|:|.|.: .|:|. .|..||..|||.||
  Fly   238 NFDGESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQN-NEVAG-NLPDDDRYGIQQLY 300

Human   263 G----------PPPAST------------------------------------------------ 269
            |          |...:|                                                
  Fly   301 GTKEKTWGPYKPQTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQE 365

Human   270 ----------------------------------------------------------------- 269
                                                                             
  Fly   366 KERRRQEEERRHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRP 430

Human   270 ----------------------------------------------EEPLVPTKSV---PSGSEM 285
                                                          .||:.||.:.   |:....
  Fly   431 RERQEMERRRQEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPY 495

Human   286 PA--------------KCDPALS-FDAISTLRGEYLFFKDRYFWR--------------RSHWNP 321
            |.              |.|..:: :||||.:|||...|:..|.||              |.||:.
  Fly   496 PTVHRQHHHHNKPRKPKPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGYPTEIRRHWSA 560

Human   322 EPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHTLGFPPTIRK 386
            .||         :| :.:||.||...|..|| |.|.|::......:..|:|:.:.:||.|||:..
  Fly   561 LPE---------NL-TKVDAVYENKQRQIVF-FIGREYYVFNSVMLAPGFPKPLASLGLPPTLTH 614

Human   387 IDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGVEPKVDAVLQAF-GFFYFFS 450
            |||:.......:||..:...|||.|:.:..:|..:||.:: .:.||...:||..|.. |..|||.
  Fly   615 IDASFVWGHNNRTYMTSGTLYWRIDDYTGQVELDYPRDMS-IWSGVGYNIDAAFQYLDGKTYFFK 678

Human   451 GSSQFEFDPNARMVTHI---LKSNSWLHC 476
            ....:||:.:...|.|.   |.:..|:.|
  Fly   679 NLGYWEFNDDRMKVAHARAKLSARRWMQC 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MMP10NP_002416.1 PG_binding_1 33..86 CDD:460223 13/53 (25%)
Cysteine switch. /evidence=ECO:0000250 89..96 5/6 (83%)
Peptidase_M10 107..263 CDD:425668 79/161 (49%)
HX 286..476 CDD:238046 64/222 (29%)
Hemopexin 1 286..335 19/77 (25%)
Hemopexin 2 336..382 14/45 (31%)
Hemopexin 3 384..432 12/47 (26%)
Hemopexin 4 433..476 13/46 (28%)
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 13/50 (26%)
Peptidase_M10 143..301 CDD:425668 79/161 (49%)
HX 513..707 CDD:238046 62/205 (30%)

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