DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk15 and del-4

DIOPT Version :9

Sequence 1:NP_001097937.1 Gene:ppk15 / 43188 FlyBaseID:FBgn0039424 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:530 Identity:103/530 - (19%)
Similarity:184/530 - (34%) Gaps:160/530 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FVTNIK----DYCTNCTLAGFAYIANSRLHFMERIFWLICVFMS-SLGCYQ---LIMGYQRSFPT 76
            |.|.:|    |:....:..|..:|..:...:: |.||::.|.:| :|..:|   |:..| .||  
 Worm     4 FWTGLKYVFTDFSCWTSTHGVPHIGMANARWL-RAFWILVVVVSIALFIWQFITLLTNY-LSF-- 64

  Fly    77 RAVSIVYESLPPFSKWKFPAVSVCELAYRGNLFP-KFEEYITSLGVDVTGDYPYDVETGVSILLF 140
               |:..|:...|::..||.|::|      :|.| |..|             ...|:..:|.|: 
 Worm    65 ---SVNTETTLQFAERTFPTVTIC------HLNPWKLSE-------------TKSVDPDMSALI- 106

  Fly   141 PALYNENGLKGKCGTVHKNCTDACAKCPSDNYRQILTW---YGANCS---------------DLF 187
             ..||.:....:.|..        |...:|..:|...|   |....:               |:.
 Worm   107 -DAYNSDSSSAQFGLP--------ASLTADRQQQASKWTLMYSERLNEKQYNDAADIAYSYDDMV 162

  Fly   188 VECKLSHEPFDC-CRHFLPLLTP-FGRCYMLNSLLNNEPGSKHWLPNELDPAHQKAVINVITRLD 250
            |.|  ::....| ...|.....| :|.|...|:       ...:..:...|.:.   :.::.|.|
 Worm   163 VSC--TYNAKTCNITDFNDFYNPSYGNCLQFNT-------DGMYSSSRAGPLYG---LRMVMRTD 215

  Fly   251 ------------VQISVINAEDIPHTAFF----PPGIPLITEGLSKYMQFNQVAMKNDPDVKDID 299
                        |.|.:...::||:...|    ||| ...:.|:| |:|..:           :.
 Worm   216 QDTYLPWTEASGVIIDIHMQDEIPYPDVFGYFAPPG-TASSLGVS-YVQTTR-----------LS 267

  Fly   300 PKIRSCFFPEEIPADSLYKSYSFSVCITECIRRLQMKACNCTSFLYNPNAD-PRYPDCD-----L 358
            ....||....::.......:|:...|...|::...:.:|.|....|:..:: .:|..||     |
 Worm   268 KPYGSCTTKTKLKTTHYTGTYTVEACFRSCMQEKIIASCGCYYPAYSHASNTTQYVSCDNGVQTL 332

  Fly   359 EGFLCLEKTRMIKPDSRVLVNNNKGNN----ASCGCLPSCNDGDITTIYEPLLFVRNPNKYYNGT 419
            ....|::           |:|:.....    ..|.|...|   :|.:....:...:.|:..|..|
 Worm   333 SNLNCVD-----------LINSADSTEFDVLTDCDCPQPC---EIDSYGVTVSTAQWPSDSYVPT 383

  Fly   420 LDMPFLPT-----------DQYRRQSL-------------------RTPLDVVVSMGGMLGLFLG 454
            ...|..|:           |.|:..::                   .|.::.:..:||.:|||||
 Worm   384 ECNPGGPSGPWDASGESCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLG 448

  Fly   455 ASILSAIEFV 464
            .||:||||::
 Worm   449 MSIISAIEYL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk15NP_001097937.1 ASC 27..466 CDD:279230 99/519 (19%)
del-4NP_492230.2 ASC 8..466 CDD:295594 101/526 (19%)
deg-1 14..460 CDD:273309 100/520 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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