DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and rbbA

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:YP_026225.1 Gene:rbbA / 947998 ECOCYCID:EG12223 Length:911 Species:Escherichia coli


Alignment Length:799 Identity:190/799 - (23%)
Similarity:332/799 - (41%) Gaps:181/799 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VPPTAPAATATTANSDLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNM 72
            :||..|      .|:::.:.||         .|..|             :||.    |.:|.:|.
E. coli   265 IPPYQP------ENAEIAIEAR---------DLTMR-------------FGSF----VAVDHVNF 297

  Fly    73 TVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALY 137
            .:|:|.|:|.||::||||:|.:..:.|....:.||.| |.|:|..........|:|||.|..:||
E. coli   298 RIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW-LFGQPVDPKDIDTRRRVGYMSQAFSLY 361

  Fly   138 GEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPNASKFV-KNLSGGQQRRVSLAVALLHEP 201
            .|.|:|:.|.....:..:.:.:|..|...:.:...|.:....: ::|..|.::|:|||||::|.|
E. coli   362 NELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRP 426

  Fly   202 ELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDECAQAHMIGLLRGGKMLAEESP 266
            |:|||||||.|||||.|...|..:||:::....|:.|:||:::|..:...|.|:..||:||..:|
E. coli   427 EMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTP 491

  Fly   267 DYLRQQYNADSLEDVFLKLSVLQNMGKRRRSSIAQEIVEQVT-VP--AISNPALDMSDEQHAAEI 328
            ..|.::..|.|||:.|  ::.||....:...:.|..:|...| .|  ..|...|.....:.|.|:
E. coli   492 QELVEKRGAASLEEAF--IAYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALEL 554

  Fly   329 SGEFGDNISMSSAARDPISTTAPAAPPLPPPQEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRNV 393
                         .|||:.:|                                            
E. coli   555 -------------RRDPVRST-------------------------------------------- 562

  Fly   394 GVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCNQTMLSCRYLDM 458
               |.::| .|:.:|:..|.|..|...|:.||.:.:                  ||:.|..:...
E. coli   563 ---LALMG-TVILMLIMGYGISMDVENLRFAVLDRD------------------QTVSSQAWTLN 605

  Fly   459 LVKNKSMVVQ--YVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGRYAEDGTIESSDLAV 521
            |..::..:.|  ..:.||:. ..:|.|....|:.|.||:          ||....||  ..:|.|
E. coli   606 LSGSRYFIEQPPLTSYDELD-RRMRAGDITVAIEIPPNF----------GRDIARGT--PVELGV 657

  Fly   522 RMDWSNQQISQLLYRDLQYTFFNFVGDMLS-DCDVNPKLGRVPVDFQHPVYGYRNPNFTDFAA-- 583
            .:|.:....::.:...:|....:::.|:.| ......:.|.:.::.:   |.| ||:.....|  
E. coli   658 WIDGAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETR---YRY-NPDVKSLPAIV 718

  Fly   584 PGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQV-------VTQFTVMLSQT 641
            |.||..::..:...:::.:::.::..|.:....|...|..|.||.:.       :..|.::...:
E. coli   719 PAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLS 783

  Fly   642 TFVLIVSF--YFFELTLVGNIWLVVALCILNGLCGMSFGFVISCAVDTERTATY-VAMGSFLPIV 703
            .||..|..  .|..|||...:::::|       .||  |.:||..:.::..|.: .|:.:.:|..
E. coli   784 VFVFGVPHKGSFLTLTLAALLYIIIA-------TGM--GLLISTFMKSQIAAIFGTAIITLIPAT 839

  Fly   704 MLCGIIWPI---EG-------MFPLLQFFTAFLPLTKPTESMRSILQRGWGIDNPVVYNGFISIS 758
            ...|:|.|:   ||       ::|...|.|    :.:.|.|....|...|.:        ||.:.
E. coli   840 QFSGMIDPVASLEGPGRWIGEVYPTSHFLT----IARGTFSKALDLTDLWQL--------FIPLL 892

  Fly   759 SWVLVFLVLTILLLKFKKG 777
            ..:.:.:.|:|||||.::|
E. coli   893 IAIPLVMGLSILLLKKQEG 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 82/235 (35%)
YadH 578..773 CDD:440604 45/216 (21%)
rbbAYP_026225.1 ABC2_perm_RbbA 12..910 CDD:468210 189/796 (24%)

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