DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33970 and ABCG41

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001329357.1 Gene:ABCG41 / 827186 AraportID:AT4G15215 Length:1397 Species:Arabidopsis thaliana


Alignment Length:730 Identity:147/730 - (20%)
Similarity:246/730 - (33%) Gaps:244/730 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 GSIYGLLGASGCGKTTLLSCIVGR--RRLNSGEIWVLGGRPG-----SRGSG------VPGPRIG 128
            |.:..|:|.||.||||||..:.||  |.:..|||.| ||.|.     :|.||      :..|.| 
plant   835 GVLTSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIRV-GGYPKVQETFARVSGYCEQFDIHSPNI- 897

  Fly   129 YMPQEIALYGEFTMRETLIYFG-------------------IISAMSKGDIEDRTEFLLKLLNLP 174
                        |:.|:|.|..                   ::..:...||:|      .::.||
plant   898 ------------TVEESLKYSAWLRLPYNIDAKTKNELVKEVLETVELEDIKD------SMVGLP 944

  Fly   175 NASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIIT 239
            .    :..||..|::|:::||.|:..|.::.|||||.|:|......:...:.::.:.|. ||:.|
plant   945 G----ISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVKNVAETGR-TVVCT 1004

  Fly   240 THY--IDECAQAHMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKRRRSSIAQE 302
            .|.  ||.......:.|::.|..|....|                        :||  .||...:
plant  1005 IHQPSIDIFETFDELILMKDGGQLVYYGP------------------------LGK--HSSKVIK 1043

  Fly   303 IVEQVT-VPAIS---NPA---LDMSDEQHAAEISGEFGDNISMSSAAR------DPISTTAPAAP 354
            ..|.:. ||.:.   |||   ||::.:.....:..:|......|:..:      :.:|:.:..:.
plant  1044 YFESIPGVPKVQKNCNPATWMLDITCKSAEHRLGMDFAQAYKDSTLYKENKMVVEQLSSASLGSE 1108

  Fly   355 PLPPPQEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRNVGVMLFIVGLPVVQILLFCYAIGHDPT 419
            .|..|.....:.|        ..|.|.:||......||.                     .|:.|
plant  1109 ALSFPSRYSQTGW--------GQLKACLWKQHCSYWRNP---------------------SHNLT 1144

  Fly   420 GLKLAVANHEMSGEMIMEQFCPVHTGCNQTMLSCRYLDML-------VKNKSMVVQYV-TDDEMA 476
            .:...:.|..:...:..::...::   ||..|...:..|.       :.|.:.|:.:: |:..:.
plant  1145 RIVFILLNSLLCSLLFWQKAKDIN---NQQDLFSIFGSMYTIVIFSGINNCATVMNFIATERNVF 1206

  Fly   477 YEE--VRKGRAWAALVIQPNYTASLMERVEDGRYAEDGTIESSDLAVRMDWSNQQISQLLYRDLQ 539
            |.|  .|...:||       |:.|                             |.:.::.|..||
plant  1207 YRERFARMYSSWA-------YSFS-----------------------------QVLVEVPYSLLQ 1235

  Fly   540 YTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYGYRNPNFTDFAAPGVILTIIFFLAVAVTSGAML 604
            ...          |.:          ..:|:.||....:..|.:    |..||.        ::|
plant  1236 SLL----------CTI----------IVYPMIGYHMSVYKMFWS----LYSIFC--------SLL 1268

  Fly   605 IDRNEGMLERCLVAGITGPEILLSQVVTQFTVMLSQTTFVL----IVSFYFFELTLVGNIWLVVA 665
            |....|||...|...|   .:.|:...|.|:::.....||:    |..::.:...|....|    
plant  1269 IFNYCGMLMVALTPNI---HMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSW---- 1326

  Fly   666 LCILNGLCGMSFGFVISCAVDTERTATYV----AMGSF-----------LPIVMLCGIIWPIEGM 715
              :|.||....:|       |.|:..|..    ::.:|           |.:|....|.:||. :
plant  1327 --VLEGLLSSQYG-------DVEKEITVFGEKKSVSAFLEDYFGYKHDSLAVVAFVLIAFPII-V 1381

  Fly   716 FPLLQFFTAFLPLTK 730
            ..|..||.:.|...|
plant  1382 ASLFAFFMSKLNFQK 1396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 61/226 (27%)
CcmA 54..321 CDD:224054 73/284 (26%)
ABC2_membrane_3 394..770 CDD:289468 62/366 (17%)
ABC2_membrane <581..738 CDD:279410 37/169 (22%)
ABCG41NP_001329357.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.