DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33970 and ABCB1

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_181228.1 Gene:ABCB1 / 818265 AraportID:AT2G36910 Length:1286 Species:Arabidopsis thaliana


Alignment Length:556 Identity:123/556 - (22%)
Similarity:217/556 - (39%) Gaps:120/556 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AAADGVPPTAPAATATTANSDLDLAARRRLFISQPSTLATRRQQAV-------CVRRAHKMYGSS 60
            |.....|..|..|.|..|      ||:....|....|:....:..|       .|...:..:...
plant   320 ALGQSAPSMAAFAKAKVA------AAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYP 378

  Fly    61 KNPNV-VLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEI-------------WVL 111
            ..|:| :|:...::||.|....|:|:||.||:|::|.|......|||::             |: 
plant   379 SRPDVKILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWL- 442

  Fly   112 GGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPNA 176
                        ..:||.:.||.||:.. :::|.::       :.:.| .|:.| :.:...:.||
plant   443 ------------RQQIGLVSQEPALFAT-SIKENIL-------LGRPD-ADQVE-IEEAARVANA 485

  Fly   177 SKFV---------------KNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLV 226
            ..|:               ..|||||::|:::|.|:|..|.:|:|||.|..:|....:.:.:.| 
plant   486 HSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEAL- 549

  Fly   227 DITKNGHTTVIITTHYIDECAQAHMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQN- 290
            |....|.||:|| .|.:....:|.::.:|:.|.:....:.|.|..:    ....|:.||..:|. 
plant   550 DRFMIGRTTLII-AHRLSTIRKADLVAVLQQGSVSEIGTHDELFSK----GENGVYAKLIKMQEA 609

  Fly   291 -----MGKRRRSSIAQEIVEQVTVPAISNPALDMSDEQHAAEISGEFGDNISMSSAARDPISTTA 350
                 |...|:||........    ::|:|.:..:.....:..|....|    .|.:...:|..|
plant   610 AHETAMSNARKSSARPSSARN----SVSSPIMTRNSSYGRSPYSRRLSD----FSTSDFSLSIDA 666

  Fly   351 PAAPPLPPP----QEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRNVG-VMLFIVGLPVVQILLF 410
            .:.|.....    ::...||| .|..|.|..     ||..|  :.:|| |:...:......:|..
plant   667 SSYPNYRNEKLAFKDQANSFW-RLAKMNSPE-----WKYAL--LGSVGSVICGSLSAFFAYVLSA 723

  Fly   411 CYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCNQTMLSCRYL-----DMLVKN-----KSM 465
            ..::.::|        :||...:.| :::|.:..|.:...|....|     |::.:|     :..
plant   724 VLSVYYNP--------DHEYMIKQI-DKYCYLLIGLSSAALVFNTLQHSFWDIVGENLTKRVREK 779

  Fly   466 VVQYVTDDEMAY---EEVRKGRAWAALVIQPNYTAS 498
            ::..|..:|||:   ||....|..|.|.:..|...|
plant   780 MLSAVLKNEMAWFDQEENESARIAARLALDANNVRS 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 62/257 (24%)
CcmA 54..321 CDD:224054 71/301 (24%)
ABC2_membrane_3 394..770 CDD:289468 24/119 (20%)
ABC2_membrane <581..738 CDD:279410
ABCB1NP_181228.1 PTZ00265 43..1264 CDD:240339 123/556 (22%)
ABC_membrane 49..319 CDD:279056
ABC_MTABC3_MDL1_MDL2 368..607 CDD:213216 65/267 (24%)
ABC_membrane 705..970 CDD:279056 25/120 (21%)
ABC_MTABC3_MDL1_MDL2 1024..1263 CDD:213216
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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