DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33970 and abcg4b

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:793 Identity:131/793 - (16%)
Similarity:244/793 - (30%) Gaps:344/793 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 IYGLLGASGCGKTTLLSCIVGRRRLN-SGEIWVLGGRPGSRGSGVPGPRI-----GYMPQEIALY 137
            :.|::|.||.||:||::.:.|.|... :|:|.|.|        .:..||.     .|:.||..|.
Zfish    95 LIGIMGPSGAGKSTLMNILAGYRETGMTGQILVNG--------KLRDPRTFRKMSCYIMQEDKLL 151

  Fly   138 GEFTMRETLIYFGIISAMSK--GDIEDRTEFLLKLLNLPNASKFVK----NLSGGQQRRVSLAVA 196
            ...:::|.:    ::||..|  ...|.:.|.:.::|......:.|.    :|||||.:|:::|:.
Zfish   152 PHLSVQEAM----MVSANLKLNESSEVKKELIKEILTALGLHECVHTRTVSLSGGQCKRLAIALE 212

  Fly   197 LLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTH--------YIDECAQAHMIG 253
            |::.|.::..||||.|:|......:...:..:.:.|. |:|.|.|        ..|:      :.
Zfish   213 LVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGR-TIICTIHQPSAKLFEMFDK------LY 270

  Fly   254 LLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKRRRSSIAQEIVEQVTVPAISNPALD 318
            :|..|:.:.:.|..||               :..|:.:|              :..|...|||  
Zfish   271 ILSQGQCIYKGSVPYL---------------IPYLRGLG--------------LHCPTYHNPA-- 304

  Fly   319 MSDEQHAAEI-SGEFGDNISMSSAARDPISTTAPAAPPLPPPQEIPTSFWYNLHVMQSHHLHALI 382
                ....|: |||:||                     |.|                        
Zfish   305 ----DFIIEVASGEYGD---------------------LNP------------------------ 320

  Fly   383 WKNFLWMMRNVGVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCN 447
                                     :||                      |.:....|.:...||
Zfish   321 -------------------------VLF----------------------EAVQGGMCALEEKCN 338

  Fly   448 ----QTMLSCRYLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGRY 508
                .|:.||                                 ||            :.|:|..:
Zfish   339 CIDKTTVTSC---------------------------------AA------------KCVKDPGH 358

  Fly   509 AEDGTIESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGD-------MLSDCDVNPKLGRVPVDF 566
            .|..|..:|.|.        |...|..|    ||.....|       ::|...:...:|.:.::.
Zfish   359 VESHTFATSSLT--------QFCILFKR----TFITICRDQVLTHLRLMSHISIGVLIGLLYLNI 411

  Fly   567 QHPVYG-YRNPNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQV 630
            .:.... :.|..|            :||..:.:..||::                  |.:|    
Zfish   412 GNDASKVFNNTGF------------LFFSMLFLMFGALM------------------PTVL---- 442

  Fly   631 VTQFTVMLSQTTFVLIVSFYFFEL-----------------------TLVGNIW----------- 661
                |..|....|:.....|::.|                       ::|  .|           
Zfish   443 ----TFPLEMAVFLREHLNYWYSLKAYYLAKTMADIPFQVLCPIMYCSIV--YWMTEQPPEASRY 501

  Fly   662 -LVVALCILNGLCGMSFGFVISCAVDTERTATYVAMGSFLPIVMLCGIIWPIEGMFPLLQF--FT 723
             |.:||.|...|...|.|.::..|..:.:.||:|...:.:|:::..|.....:.:...||:  :.
Zfish   502 LLFLALSICTALVAQSLGLLVGAASTSLQVATFVGPVTGIPVLLFSGFFVNFDTIPEYLQWSSYV 566

  Fly   724 AFL--------------------------PLTKPTESMRSILQRGWGIDNPVVYNGFISISSWVL 762
            :::                          ...:|.|.::.:     .:::..:|..||.:..:.:
Zfish   567 SYVRYGFEEVILSIYGMNRTERECPGRVCKFQRPEEVLQLL-----DVEDAKLYMDFIVLGIFFV 626

  Fly   763 VFLVLTILLLKFK 775
            :..:.|.::|::|
Zfish   627 ILRLATYVVLRYK 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 53/210 (25%)
CcmA 54..321 CDD:224054 60/261 (23%)
ABC2_membrane_3 394..770 CDD:289468 61/450 (14%)
ABC2_membrane <581..738 CDD:279410 30/219 (14%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 131/793 (17%)
ABCG_EPDR 57..281 CDD:213180 51/204 (25%)
ABC2_membrane 375..574 CDD:279410 37/242 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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