DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33970 and abcg2d

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_009292498.3 Gene:abcg2d / 735310 ZFINID:ZDB-GENE-050517-38 Length:658 Species:Danio rerio


Alignment Length:803 Identity:158/803 - (19%)
Similarity:278/803 - (34%) Gaps:281/803 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLN--SGEIWV 110
            ||.|       ::....::|| ||..:..| :..:||.:|.||::.|..:.||:...  |||:.|
Zfish    56 VCRR-------TTVQKEILLD-LNGIMRPG-LNAILGPTGSGKSSFLDVLAGRKDPAGLSGEVLV 111

  Fly   111 LGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGII---SAMSKGDIEDRTEFLLKLLN 172
            .|....:....:.    ||:.|:..:.|..|:||.|.:...:   |.:|..:.|.|...|:..|.
Zfish   112 NGALQPANFKCLS----GYVVQDDIVMGTLTVRENLSFSAALRLSSHVSPREKEARVNHLISELG 172

  Fly   173 LPN------ASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKN 231
            |..      .::.::.:|||:::|.|:.:.|:.:|.:|.|||||.|:|.....|:...|..:...
Zfish   173 LNKVADSKVGTQIIRGISGGERKRTSIGMELIIDPSVLFLDEPTTGLDASTAHSVLLLLKRMAGQ 237

  Fly   232 GHTTVIITTH--------YIDECAQAHMIGLLRGGKML----AEESPDYLR------QQYN--AD 276
            |. |:|::.|        ..|.      :.||..||.:    |:::.||..      :.:|  ||
Zfish   238 GR-TIIMSIHQPRFSIYRLFDS------LTLLANGKQVYHGPAQDALDYFSNIGYACEAHNNPAD 295

  Fly   277 SLEDVFLKLSV--LQNMGKRR-------RSSIAQEIVEQVTVPAISNPALDMSDEQHAAEISGEF 332
            ...||....||  :||.|...       |.|:..:::|:....:.:...        .||:    
Zfish   296 FFLDVINGSSVTKIQNNGDAECDVSAVSRQSVEDQLMEKYRSCSFARAV--------RAEL---- 348

  Fly   333 GDNI------SMSSAARDPISTTAPAAPPLPPPQEIPTSFWYNLHVMQSHHLHALIWKNFLWMMR 391
             |:|      |.||.|.:..|.|            ..:||        ...|..::|:.|..:|.
Zfish   349 -DHIIQTKDSSSSSVAAECHSIT------------YSSSF--------CQQLRWVLWRTFWNLML 392

  Fly   392 N----------VGVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGC 446
            |          ..:|..|||      .:| |.:..|.:|::      ...|.:    |......|
Zfish   393 NPQTSVAQLAVTTLMAAIVG------AIF-YGVKDDQSGIQ------NRFGVL----FFITTNQC 440

  Fly   447 NQTMLSCRYLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGRYAED 511
            ..|:             |....::|:.::...|...|          .|..|:.           
Zfish   441 FSTL-------------SAAELFITERKLFIHEYTSG----------YYRVSVF----------- 471

  Fly   512 GTIESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYGYRNP 576
                                             |:..:|||.                       
Zfish   472 ---------------------------------FLSKILSDI----------------------- 480

  Fly   577 NFTDFAAPGVILT--IIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQFTVMLS 639
             .|....|.|:.:  :.|.:.:..|:.|..|.....:|..|..|.       ::..::....:::
Zfish   481 -ITQRTIPSVLFSCVVYFMIGLKPTASAFFIFMLTVILVSCTAAA-------MAMAISADQSVVA 537

  Fly   640 QTTFVLIVSFYFFEL--TLVGNI-----WL--VVALCI---------LNGLCGMSFGFVISCAVD 686
            ....::.|||.|..:  .|:.|:     ||  :..|.|         :|...|:||     |...
Zfish   538 VANILMTVSFIFMMIFSGLLVNLKSIMDWLSWLKYLSIPRYGLEALEINEFVGLSF-----CGNV 597

  Fly   687 TERTATYVAMGSFLPIVMLCGIIWPIEGMFPLLQFFTAFLPLTKPTESMRSILQRGWGIDNPVVY 751
            :|..|:..|.      |::|                |....||     .:.|....||:     :
Zfish   598 SESLASPAAH------VLMC----------------TGEQHLT-----FQGIDYSSWGL-----W 630

  Fly   752 NGFISISSWVLVFLVLTILLLKF 774
            ...::::...|:||::..:.|:|
Zfish   631 QNHVALTVMTLIFLIIAYIKLRF 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 65/244 (27%)
CcmA 54..321 CDD:224054 75/306 (25%)
ABC2_membrane_3 394..770 CDD:289468 61/395 (15%)
ABC2_membrane <581..738 CDD:279410 32/176 (18%)
abcg2dXP_009292498.3 PRK10535 56..658 CDD:333000 158/803 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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