DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33970 and abcg2b

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001034155.1 Gene:abcg2b / 570453 ZFINID:ZDB-GENE-050517-36 Length:618 Species:Danio rerio


Alignment Length:792 Identity:155/792 - (19%)
Similarity:269/792 - (33%) Gaps:252/792 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIV 98
            :..|..:.|.:....|:|.:..:.........:|..:: .:.|..:..::||:|.|||:||..:.
Zfish    21 VKVPGPILTYQNIHYCIRESRGLCCKKAPERDILKNVS-GIMKTGLNAIMGATGSGKTSLLDVMA 84

  Fly    99 GR---RRLNSGEIWVLGGRPGSRGSGVPGPRI--GYMPQEIALYGEFTMRETLIYFGII----SA 154
            ||   |.|.||::.|      .........|:  .|:.|:..|.|..|:||.|::.|.:    ..
Zfish    85 GRKDPRGLRSGQVLV------DNKLVTSDLRLMSAYVVQDDVLMGTLTVRENLLFSGNLRLPREQ 143

  Fly   155 MSKGDIEDRTEFLLKLLNLPN------ASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGV 213
            .|..|.:.:.|.:::.|.|.:      .::|::.:|||:::|.|:.:.|:..|.||.|||||.|:
Zfish   144 FSSADKKKKVESIIEELGLEDCADTKIGTEFIRGVSGGERKRCSIGMELITSPTLLFLDEPTTGL 208

  Fly   214 DPVLRQSIWDHLVDITKNGHTTVIITTHYIDECAQAHMIGLLRGGKMLAEESP--------DYLR 270
            |.....||...|..:::.|. |:|.:.|                       .|        |||.
Zfish   209 DSNTANSIIALLHRLSRGGR-TIIFSIH-----------------------QPRYSIFRLFDYLT 249

  Fly   271 QQYNADSLEDVFL-----KLSVLQNMGKRRRSSIAQEIVEQVTVPAISNPA---LD--------- 318
            ..:..   |.|:.     .:...|::|..|              .|.:|||   ||         
Zfish   250 LMHKG---ETVYAGPAGKAIDYFQSLGYER--------------DAFNNPADFFLDITNGETATS 297

  Fly   319 MSDEQHAAEISGE------FGDNISMSSAARDPISTTAPAAPPLPPPQEIPTSFWYNLHVMQSHH 377
            |..|:..||:..|      ..:.:...:...|.:|.....||      ...|||.|.|.|     
Zfish   298 MPTEKSLAELYRESQFCTAVDEELKCITGPSDSLSEAKSKAP------SYVTSFSYQLKV----- 351

  Fly   378 LHALIWKNFLWMMRNVGVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPV 442
               :.|:..|.::||.......:.:.::..||........|..|..|:.|...:...::      
Zfish   352 ---VCWRTGLNVVRNPQTSYAQIAMNILFALLIGLVYYQMPLTLPEALQNRIGAFFFLI------ 407

  Fly   443 HTGCNQTMLSCRYLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGR 507
                         ::|:..|.|.|..::.:              .|:.:..|          .|.
Zfish   408 -------------INMVFGNLSAVELFINE--------------RAIFVHEN----------SGG 435

  Fly   508 YAEDGTIESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYG 572
            |........|.:.|.: ..|:.:..|::..:.|.....                           
Zfish   436 YYRTSVYFLSKVFVDL-LPNRIVPILIFSSISYYMMGL--------------------------- 472

  Fly   573 YRNPNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQFTVM 637
              ||.||.|        :.|.|.|::.|                :||::          ..|.|.
Zfish   473 --NPAFTSF--------LCFALTVSLVS----------------LAGVS----------LAFLVS 501

  Fly   638 LSQTTF----VLIVSFYFFELTLVGNIWLVVALCILNGLCGMSFGFVISCAVDTERTATYVAMGS 698
            .|.:||    :|:|..:.|.:...|  :||....:||.|..:.:..:....:|.      |.:..
Zfish   502 ASVSTFAMANILVVLPFVFMMVFGG--FLVNLNSMLNWLSWLKWTSIFKYGLDA------VTINE 558

  Fly   699 FLPIVMLCGIIWPIEGMFPLLQFFTAFLPLTKPTESMRSILQRGWGIDNPV--VYNGFISISSWV 761
            ...:|:..|               .|.||.....||.        |||..|  .:...:::...|
Zfish   559 MKGLVLYSG---------------NATLPGELYLESQ--------GIDYSVWGFWQNEVALLGIV 600

  Fly   762 LVFLVLTILLLK 773
            ||.:....:.|:
Zfish   601 LVCMTFAYIQLR 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 61/244 (25%)
CcmA 54..321 CDD:224054 72/306 (24%)
ABC2_membrane_3 394..770 CDD:289468 60/381 (16%)
ABC2_membrane <581..738 CDD:279410 30/160 (19%)
abcg2bNP_001034155.1 P-loop_NTPase 39..260 CDD:304359 62/254 (24%)
3a01204 41..616 CDD:273361 151/772 (20%)
ABC2_membrane 354..557 CDD:279410 50/317 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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