Sequence 1: | NP_001034071.1 | Gene: | CG33970 / 43186 | FlyBaseID: | FBgn0053970 | Length: | 777 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006246101.1 | Gene: | Abca3 / 302973 | RGDID: | 1307174 | Length: | 1704 | Species: | Rattus norvegicus |
Alignment Length: | 364 | Identity: | 102/364 - (28%) |
---|---|---|---|
Similarity: | 173/364 - (47%) | Gaps: | 59/364 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 DLDLA-ARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGAS 86
Fly 87 GCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGI 151
Fly 152 ISAMSKGDIEDRTEFLLK-LLNLPNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDP 215
Fly 216 VLRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGKMLAEESPDYLRQQYNADSLE 279
Fly 280 DVFLKLSVLQNMGKRRRSSIAQEIVEQ------VTVPA------------ISNPALDMS------ 320
Fly 321 -----------DEQHAAEISGEFGDNISMSSAARDPIST 348 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG33970 | NP_001034071.1 | P-loop_NTPase | 48..270 | CDD:304359 | 75/223 (34%) |
CcmA | 54..321 | CDD:224054 | 86/303 (28%) | ||
ABC2_membrane_3 | 394..770 | CDD:289468 | |||
ABC2_membrane | <581..738 | CDD:279410 | |||
Abca3 | XP_006246101.1 | rim_protein | <206..1699 | CDD:130324 | 101/361 (28%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |