DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and Abca3

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_038883.2 Gene:Abca3 / 27410 MGIID:1351617 Length:1704 Species:Mus musculus


Alignment Length:291 Identity:91/291 - (31%)
Similarity:153/291 - (52%) Gaps:29/291 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DLDLAARR-RLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGAS 86
            |.|:|..| |:.:  || |.:.....:.:....|:| ..:.|.:.:|.:::.|.||..:||||.:
Mouse  1358 DQDVAEERSRILV--PS-LDSMLDTPLIINELSKVY-DQRAPLLAVDRISLAVQKGECFGLLGFN 1418

  Fly    87 GCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGI 151
            |.||||....:.|...:.||:.:| ||...|...|....|:||.||..||....|.||.|:.:..
Mouse  1419 GAGKTTTFKMLTGEETITSGDAFV-GGYSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYAR 1482

  Fly   152 ISAMSKGDIEDRTEFLLK-LLNLPNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDP 215
            :..:.:..|....|..|: ||..|:|:|.||..|||.:|::|..:||:.||.::.||||:.|:||
Mouse  1483 LRGIPERLINACVENTLRGLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDP 1547

  Fly   216 VLRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGKMLAEESPDYLRQQYNA---- 275
            |.|:.:||.:....::| ..::||:|.::|| |....:.::..|:.....||.:|:.::.:    
Mouse  1548 VARRLLWDTVARARESG-KAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSL 1611

  Fly   276 ----------DSLED--VFLKL----SVLQN 290
                      |:||:  .|:.|    |:|::
Mouse  1612 QAKVRSEGKQDALEEFKAFVDLTFPGSILED 1642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 80/252 (32%)
YadH 578..773 CDD:440604
Abca3NP_038883.2 rim_protein 1..>43 CDD:130324
rim_protein <206..1699 CDD:130324 91/291 (31%)
Blue background indicates that the domain is not in the aligned region.

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