DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33970 and Abca13

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_839990.2 Gene:Abca13 / 268379 MGIID:2388707 Length:5034 Species:Mus musculus


Alignment Length:447 Identity:110/447 - (24%)
Similarity:187/447 - (41%) Gaps:96/447 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRG 119
            |.|...|   |.:..|.:|..:..|..|||.:|.||||::|.::|.....||.|.:.|....:..
Mouse  3817 KEYEDHK---VAVQELTLTFHRDQITALLGTNGAGKTTIISMLMGLFPPTSGTITINGKNLQTDL 3878

  Fly   120 SGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISA--MSKGDIEDRTEFLLKLLNL-PNASKFVK 181
            |.| ...:|..||:..|....|:||.|:.|..|.|  .:..:::.:....|..:.| .:..|...
Mouse  3879 SKV-REELGVCPQQDVLLDNLTVREHLMLFASIKAPWWTTKELQQQVNKTLDEVELTQHQHKPAG 3942

  Fly   182 NLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDEC 246
            .||||.:|::|:.:|.:...:.::||||:.||||..|:|:||.|:...:.  .|:|.|||::||.
Mouse  3943 VLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWDILLKYREG--RTIIFTTHHLDEA 4005

  Fly   247 AQ-AHMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKR---RRSSIAQEIVEQV 307
            .. :..:.:|:.|::.....|..|::.|.......:..:.|:|:....:   |.:|:.|..:.|.
Mouse  4006 EMLSDHVAVLQQGRLRCYAPPADLKETYGQGLTLTLSKQPSILETQEPKDVARVTSLIQIYIPQA 4070

  Fly   308 ------------TVP---------------------------AISNPALD------MSDEQHAAE 327
                        |:|                           .||:..|:      :.|....:.
Mouse  4071 FLKDSCGGELTYTIPKDADRTCFKGLCQALDQNLQHLHLTGYGISDTTLEEVFLMLLQDTNKKSY 4135

  Fly   328 ISGEFGDNISMSSAARDPISTTAP------AAPP---LPPP---------QEIPTSFWYNLHVMQ 374
            |:   .|| .:......|:...:|      :.||   ||.|         |.:.        :::
Mouse  4136 IT---PDN-KVEPQNERPVGPLSPHNVSPLSTPPEGALPEPIGGCQLLLGQAVA--------LLR 4188

  Fly   375 SHHLHAL-IWKNFLW-MMRNVGVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHE 429
            ...||.| .||:... ::..|..:...:||.:||.|    ||.:.|  |||...::|
Mouse  4189 KRLLHTLRAWKSTTSDLLLPVLFVALAMGLFMVQPL----AITYPP--LKLTPGHYE 4239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 67/218 (31%)
CcmA 54..321 CDD:224054 80/317 (25%)
ABC2_membrane_3 394..770 CDD:289468 12/36 (33%)
ABC2_membrane <581..738 CDD:279410
Abca13NP_839990.2 rim_protein 3036..5019 CDD:130324 110/447 (25%)
ABC_subfamily_A 3815..4030 CDD:213230 67/218 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4135..4165 5/33 (15%)
ABC_subfamily_A 4692..4919 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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