DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and caf16

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001343004.1 Gene:caf16 / 2541846 PomBaseID:SPAC20G4.01 Length:280 Species:Schizosaccharomyces pombe


Alignment Length:218 Identity:60/218 - (27%)
Similarity:102/218 - (46%) Gaps:44/218 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVP 123
            |.|.| :.||.:.:.:||||...|:||:|.||:|||..:.|:....:|.|.| ||:...|.|.  
pombe    13 SPKQP-LSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISV-GGKDPFRESS-- 73

  Fly   124 GPRIGYMPQEIALYGEFTMRETLIYFG-----------------IISAMSKGDIEDRTEFLLKLL 171
                                ...:|.|                 :|:::......:|.:||:.:|
pombe    74 --------------------SAFVYLGTEWVNNPVIHRDMSVARLIASVGGDKFAERRDFLISIL 118

  Fly   172 NLPNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTV 236
            ::....: :..:|.|::|||.|.:.||...|:|:|||.||.:|.:.|..:.:.|.:.|:..:.|:
pombe   119 DIDLRWR-MHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATI 182

  Fly   237 IITTHYIDECAQ--AHMIGLLRG 257
            :..||..|..|:  .|::.|..|
pombe   183 VYATHIFDGLAEWPTHLVHLSLG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 60/218 (28%)
YadH 578..773 CDD:440604
caf16NP_001343004.1 CcmA 3..214 CDD:440746 60/218 (28%)
Blue background indicates that the domain is not in the aligned region.

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