DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33970 and abt-4

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_503175.1 Gene:abt-4 / 178559 WormBaseID:WBGene00000022 Length:1802 Species:Caenorhabditis elegans


Alignment Length:332 Identity:95/332 - (28%)
Similarity:159/332 - (47%) Gaps:30/332 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASG 87
            |.|:.|.:    |....||...:.|:......|.||   |.|.| .|:|..|.....:||||.:|
 Worm  1429 DSDVIAEK----SVVQRLANNNKTALVSNNLVKWYG---NFNAV-KGVNFHVNSKDCFGLLGVNG 1485

  Fly    88 CGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGII 152
            .|||:....:.|...::||:.:|.|....:..... |...||.||..|:..|.:..|||..|..|
 Worm  1486 AGKTSTFQMLTGENSISSGDAYVNGWSVKNNWREA-GANTGYCPQYDAIIKEMSGEETLYMFARI 1549

  Fly   153 SAMSKGDIEDRTEFLLKLLNL-PNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPV 216
            ..:.:.||..:...::..:.: ..||:.:|..|||.:||:||.:|::..|::|:|||||.||||.
 Worm  1550 RGIPEKDIPKKVNAVIHAIGIGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPK 1614

  Fly   217 LRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGKMLAEESPDYLRQQYNADSLED 280
            .|:.||:.|..:...| |.:::|:|.:||| |....:.::..||.....|..:::.:|.:.....
 Worm  1615 ARRIIWNILNRLRDLG-TALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLL 1678

  Fly   281 VFLKLSVLQNMGKRRRSSIAQEIVEQVTVPAISNPALDMSDEQHAAEISGEF---GDNISMSSAA 342
            :.||   .:|..::.:|:|.|.....|.            .|:|..:::.:.   ||:.|.....
 Worm  1679 IRLK---NRNDAEKTKSTIKQTFRGSVI------------KEEHVLQLNFDIPRDGDSWSRLFEK 1728

  Fly   343 RDPISTT 349
            .:.:||:
 Worm  1729 LETVSTS 1735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 73/223 (33%)
CcmA 54..321 CDD:224054 81/268 (30%)
ABC2_membrane_3 394..770 CDD:289468
ABC2_membrane <581..738 CDD:279410
abt-4NP_503175.1 ABC2_membrane_3 <281..523 CDD:289468
NosY <377..524 CDD:224196
CcmA 581..905 CDD:224054
ABC_subfamily_A 586..815 CDD:213230
ABC2_membrane_3 <1078..1318 CDD:289468
ABC_subfamily_A 1450..1668 CDD:213230 73/223 (33%)
drrA 1457..1755 CDD:130256 88/300 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.