DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33970 and ABCA10

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001364250.1 Gene:ABCA10 / 10349 HGNCID:30 Length:1543 Species:Homo sapiens


Alignment Length:864 Identity:174/864 - (20%)
Similarity:307/864 - (35%) Gaps:245/864 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIW 109
            ::|:.:|...|.|.........|.|:...:.:|.|..:||.:|.||:|||:.:.|......|...
Human   388 KEAIRIRNVIKEYNGKTGKVEALQGIFFDIYEGQITAILGHNGAGKSTLLNILSGLSVSTEGSAT 452

  Fly   110 VLGGRPGSRGSGVPG-----PRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLK 169
            :.    .::.|.:..     ..||:.||....:...|:||.|..|..|..:...::|...:.::.
Human   453 IY----NTQLSEITDMEEIRKNIGFCPQFNFQFDFLTVRENLRVFAKIKGIQPKEVEQEVKRIIM 513

  Fly   170 LLNLPNASKFV-KNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIW----DHLVDIT 229
            .|::.:....: |.|||||:|:::|.:|:|.:|::|:|||||.|:||..|..:|    :|.||  
Human   514 ELDMQSIQDIIAKKLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPFSRHRVWSLLKEHKVD-- 576

  Fly   230 KNGHTTVIITTHYIDE-----------------CAQAHM-------IGL---LRGGKMLAEESPD 267
                ..::.:|.::||                 ||.:.:       ||.   |...:|...|...
Human   577 ----RLILFSTQFMDEADILADRKVFLSNGKLKCAGSSLFLKRKWGIGYHLSLHRNEMCDTEKIT 637

  Fly   268 YLRQQYNADS---------------LE------DVFLKLSVLQNMGKRRR----SSIAQEIVEQV 307
            .|.:|:..|:               ||      |::..|....:.|.|..    :|:.:..:...
Human   638 SLIKQHIPDAKLTTESEEKLVYSLPLEKTNKFPDLYSDLDKCSDQGIRNYAVSVTSLNEVFLNLE 702

  Fly   308 TVPAISNPALDMSDEQHAAEISGEFGDNISMSSA------ARDPISTTAPAAPPLPPPQEIPTSF 366
            ...||..|..|:. :|....::...||...|...      .|..:|:.|               .
Human   703 GKSAIDEPDFDIG-KQEKIHVTRNTGDESEMEQVLCSLPETRKAVSSAA---------------L 751

  Fly   367 WYNLHVMQSHHLHALIWKNFLWMMRN---VGVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANH 428
            |       ...::|:....||.:.|.   :..:|.::|:..:.|:|                   
Human   752 W-------RRQIYAVATLRFLKLRRERRALLCLLLVLGIAFIPIIL------------------- 790

  Fly   429 EMSGEMIMEQFCPVHTGCNQTMLSCRYLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQP 493
                |.||.:... .|.|.:...|..:|.:                   |::.|....:.|::  
Human   791 ----EKIMYKVTR-ETHCWEFSPSMYFLSL-------------------EQIPKTPLTSLLIV-- 829

  Fly   494 NYTASLMERVEDGRYAEDGTIESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGDMLSD------ 552
            |.|.|.:|.:......:|..:|..      |:.|:..|.    |..|.....|.....|      
Human   830 NNTGSNIEDLVHSLKCQDIVLEID------DFRNRNGSD----DPSYNGAIIVSGDQKDYRFSVA 884

  Fly   553 CDVNPKLGRVPVDFQHPVYGYRNP------NFTD--------FAAPGVILTI------IFFLAVA 597
            |:.. ||...||     :.|..:.      |||:        |:...::|.:      ||.|.:.
Human   885 CNTK-KLNCFPV-----LMGIVSNALMGIFNFTELIQMESTSFSRDDIVLDLGFIDGSIFLLLIT 943

  Fly   598 -----VTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQ----FTVMLSQTTFVLIVSFYFFE 653
                 ....:.:.|..:.:..:..::|:........|.:..    |.::.|   ..||..|.|..
Human   944 NCVSPFIGMSSISDYKKNVQSQLWISGLWPSAYWCGQALVDIPLYFLILFS---IHLIYYFIFLG 1005

  Fly   654 LTLVGNIWLVVALCIL-----------------------NGLCGMSFG-FVISCAVDTERTAT-Y 693
            ..|...:..|:.:||:                       ||.  .||| |:|...|.|...:| |
Human  1006 FQLSWELMFVLVVCIIGCAVSLIFLTYVLSFIFRKWRKNNGF--WSFGFFIILICVSTIMVSTQY 1068

  Fly   694 VAMGSFLPIVMLCGIIWPIEGMFPLLQFFTAFLPLTKPTESMR---SILQRGWGIDNPVVYNGFI 755
            ..:.     ::||.|..|   .|.||.:....:.|    :.||   |:..|...::..::....|
Human  1069 EKLN-----LILCMIFIP---SFTLLGYVMLLIQL----DFMRNLDSLDNRINEVNKTILLTTLI 1121

  Fly   756 SISSWVLVFLVLTILLLKF 774
            .....|:...|:..|.:|:
Human  1122 PYLQSVIFLFVIRCLEMKY 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 65/258 (25%)
CcmA 54..321 CDD:224054 78/328 (24%)
ABC2_membrane_3 394..770 CDD:289468 80/438 (18%)
ABC2_membrane <581..738 CDD:279410 39/199 (20%)
ABCA10NP_001364250.1 rim_protein <37..1520 CDD:130324 174/864 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1153..1177
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.