DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33970 and abca2

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_031746716.1 Gene:abca2 / 100498548 XenbaseID:XB-GENE-969968 Length:2496 Species:Xenopus tropicalis


Alignment Length:998 Identity:199/998 - (19%)
Similarity:349/998 - (34%) Gaps:316/998 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QPSTLATRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGR 100
            :||.|..    .||:.:..|:|.:.|  .:.|:.|::.:.:..:...||.:|.||||.:|.:.|.
 Frog  1032 EPSHLPL----VVCIDKLTKIYKTGK--KLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGL 1090

  Fly   101 RRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTE 165
            ....||...:.|....:..:.: ...:|..||...|:.:.|:.|.|.::..:..|::.:|....:
 Frog  1091 FPPTSGSATIYGHDIRTEMNEI-RKSMGMCPQHNVLFDKLTVEEHLWFYSRLKGMAEEEIRKEMD 1154

  Fly   166 FLLKLLNLPN-ASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDIT 229
            .:::.|.|.| ....|:.||||.:|::|:|:|.:...:.:||||||.||||..|::||| |:...
 Frog  1155 KMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSKAVILDEPTAGVDPYARRAIWD-LILKY 1218

  Fly   230 KNGHTTVIITTHYIDECAQAHMIG----LLRGGKMLAEESPDYLRQQY----------------- 273
            |.|. |::::||::||   |.::|    ::..||:....||.:|:..|                 
 Frog  1219 KQGR-TILLSTHHMDE---ADLLGDRIAIISHGKLKCYGSPLFLKSTYGDGYKLTVVKNQSGPDT 1279

  Fly   274 ---------------------------------NAD----------------------------- 276
                                             |.:                             
 Frog  1280 GHTGPSCISPCSEPRVSQFIKKYVASCLLVSDTNTELSYILPSESVRKGCFERLFQHLEQNLSDL 1344

  Fly   277 ----------SLEDVFLKLS----VLQNMG---KRRRSSIAQEIVE------QVTVPAISNPALD 318
                      :||:||||:|    .|:|..   |..:....:.:::      .....|:..|.::
 Frog  1345 ELTSFGLMDTTLEEVFLKVSEEDQSLENSDADIKESKKDTLRPLIQPDGGTGSPLTDALEKPEVE 1409

  Fly   319 MSDEQHAAEISG-----EFGDNISMSSAARD-------------PISTTAPAAPPL----PPPQE 361
            :::....|:.|.     ..|.:.|:.|...|             |:......|..|    |..:|
 Frog  1410 LNNFASEAKTSQSPSSLRSGSSSSVGSVRGDEGGAYAEFYGDYSPLFDNLQDAENLSLHEPETEE 1474

  Fly   362 --IPTSFWYNLH--VMQSHHLHALIWKNFLWMMRNVGVMLFIVGLP------VVQILLFCYAIG- 415
              :.....|.|.  .::....|.||.|.|....||...:...:.||      .:.:.|....|| 
 Frog  1475 QVLDGQGSYKLEGSWLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGD 1539

  Fly   416 -----------HD---PTGLKLAVANHEM-----------SGEMIMEQF---------CPVHTGC 446
                       |:   |.|..:..||.|.           ..:.::..|         |.:.|..
 Frog  1540 LPPLILSPSQYHNYTQPKGNFVPYANEEQPEYRIKLSPDAGPQQLVNTFHLPSGIGATCVLKTAF 1604

  Fly   447 NQTMLSCRYLDMLV--------KNKSMVVQYVTDDEMAYEEVRKG-------------------- 483
            |.|      ||.||        ::|.:..||.  |.|..:...:|                    
 Frog  1605 NST------LDQLVQSLNMNSSESKMLAAQYF--DAMCVDSFTQGLPLSNFVPPPPSPAPSDYPP 1661

  Fly   484 -----RAWAALVIQP--------NYTASLMERVED-------------------GRYAEDGTIES 516
                 |.|.|....|        ..|.||..|:.:                   |.:.....:.:
 Frog  1662 DEDLSRLWNATTFPPEPVQAEAVTSTPSLPRRIHEPIRCTCSMQGTGFSCPSGVGGHPHQMKVVT 1726

  Fly   517 SDLAVRMDWSNQQISQ-LLYRDLQY--------TFFNFVGDMLSD--CDVNPKLGRVPVDFQHPV 570
            .|:.|.:  |.:.:|: |||...::        ||.|....:.:.  ....|.|.::.|  :|..
 Frog  1727 GDIMVAI--SGRNVSEYLLYTSDRFRLHRYGALTFGNVQKAIPASFGAKAPPMLRKIAV--RHTA 1787

  Fly   571 YGYRNPNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQFT 635
            ..|.| |....:.|..:..:                 |..:|...|..|...|   .:..:|...
 Frog  1788 QAYYN-NKGYHSMPTYLNAL-----------------NNALLRANLPKGKGNP---AAYGITVTN 1831

  Fly   636 VMLSQTTFVLIVSFYFFELTLVGNIWLVVALCILNGLCGMSF---GFVISCAVDTERTATYVAMG 697
            ..:::|:..|.:.:......:|..|:::||         |||   .||:....:....|.::...
 Frog  1832 HPMNKTSASLSLDYLLQGTDVVIAIFIIVA---------MSFVPASFVVFLVAEKSTKAKHLQFV 1887

  Fly   698 SFL-PIV-MLCGIIWP-IEGMFP----LLQFFTAFLP-LTKPTE---SMRSILQRGWGIDNPVVY 751
            |.. |:: .|...:|. :..:.|    ::..|...|| .|.||.   .:...|..||.| .|::|
 Frog  1888 SGCNPVIYWLANYVWDMLNYLVPATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSI-TPIMY 1951

  Fly   752 --NGFISISSWVLVFLVLTILLL 772
              :.:..:.|...|||::..|.:
 Frog  1952 PASFWFEVPSTAYVFLIVINLFI 1974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 68/226 (30%)
CcmA 54..321 CDD:224054 81/373 (22%)
ABC2_membrane_3 394..770 CDD:289468 92/503 (18%)
ABC2_membrane <581..738 CDD:279410 30/170 (18%)
abca2XP_031746716.1 rim_protein 1..2430 CDD:130324 199/998 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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