DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and abca5

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001135599.1 Gene:abca5 / 100216156 XenbaseID:XB-GENE-1012902 Length:1639 Species:Xenopus tropicalis


Alignment Length:76 Identity:21/76 - (27%)
Similarity:26/76 - (34%) Gaps:22/76 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LSSTTAGTVGTTAPTANISL-NDEPQPAAAEMDEFTKEFLRNRIEVSD----------IQRLILS 76
            :|....|.|||.|...|:.: ||...|....         ||.....|          ::||...
 Frog   108 VSGLAGGFVGTPADLVNVRMQNDVKLPQGQR---------RNYAHALDGLYRVAREEGLRRLFSG 163

  Fly    77 A--GSSVAALV 85
            |  .||..|||
 Frog   164 ATMASSRGALV 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 11/48 (23%)
YadH 578..773 CDD:440604
abca5NP_001135599.1 rim_protein <87..1616 CDD:130324 21/76 (28%)
Blue background indicates that the domain is not in the aligned region.

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