DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33970 and abcg5

DIOPT Version :9

Sequence 1:NP_001034071.1 Gene:CG33970 / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_031757398.1 Gene:abcg5 / 100145776 XenbaseID:XB-GENE-963936 Length:662 Species:Xenopus tropicalis


Alignment Length:416 Identity:95/416 - (22%)
Similarity:175/416 - (42%) Gaps:98/416 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VLDGLNMTVPKGSIYGLLGASGCGKTTLLSCI---VGRRRLNSGEIWVLGGRPGSRGSGVPGPR- 126
            :|..::..:..|.|..:||.||.||||||..:   :|.:....||::|       .||.:...: 
 Frog    79 ILKDVSFFLESGQIMAILGNSGSGKTTLLDAMSGRIGHKGTLLGEVYV-------NGSQLKKEQF 136

  Fly   127 ---IGYMPQEIALYGEFTMRETLIYFGIISAM--SKGDIEDRTEFL---LKLLNLPNA---SKFV 180
               ..|:.|...|....|:||||.|..:::..  ||..|:::.:.:   |.|:.:.|:   .:..
 Frog   137 QNCFSYVLQHDTLLSYLTVRETLTYTALLALQKHSKQAIKEKVQSVMTELSLMQVANSVIGGRIF 201

  Fly   181 KNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTH---- 241
            ..:|.|::||||:|..|:.:|::::|||||.|:|.:....|...|.::.:... .|||:.|    
 Frog   202 NGISSGERRRVSIAAQLIQDPKIILLDEPTTGLDSMTANQIVLLLSELARKDR-IVIISIHQPRS 265

  Fly   242 ----YIDECAQAHMIGLLRGGKMLAEESPDYLRQQYNADSLE--------DVFLKLSVLQNMGKR 294
                ..|:      |.::..|:::...:||.:...::....|        |.::.|:.:....|.
 Frog   266 ELFRVFDK------IAIMSLGELIFCGNPDEMISFFDGCGYECPQHSNPFDFYVDLTSVDTRSKE 324

  Fly   295 RRSSIAQEIVEQVTVPAISNPALDMSDEQHAAEISGEFGDNISMSSAARDPISTTAPAAPPLPPP 359
            |      |:.......||::...:....|:|.|         .:.:|.|:......|.     ..
 Frog   325 R------ELETYSRSQAIASAYKNSDFYQNALE---------KIKTAKRNRKEKLIPF-----KR 369

  Fly   360 QEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRN-VGVML-----FIVGLPVVQILL--------- 409
            :|.|:         :...::.|:.:.|..:.|: :|:::     .|.||.:...|:         
 Frog   370 KEAPS---------ELSKVYVLLRRTFRNLSRDKIGIVMRLSQNLIFGLFIAFFLIHLSNDILKG 425

  Fly   410 -------FCY-AIGHDP-TGLKLAVA 426
                   |.| .:|..| |||..|||
 Frog   426 AVQDRLGFIYQCLGAPPYTGLLNAVA 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33970NP_001034071.1 P-loop_NTPase 48..270 CDD:304359 61/226 (27%)
CcmA 54..321 CDD:224054 69/285 (24%)
ABC2_membrane_3 394..770 CDD:289468 15/56 (27%)
ABC2_membrane <581..738 CDD:279410
abcg5XP_031757398.1 ABCG_White 60..286 CDD:213201 59/220 (27%)
3a01204 63..662 CDD:273361 95/416 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.