DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nil and AT1G78200

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_565172.1 Gene:AT1G78200 / 844156 AraportID:AT1G78200 Length:283 Species:Arabidopsis thaliana


Alignment Length:282 Identity:81/282 - (28%)
Similarity:137/282 - (48%) Gaps:41/282 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QAQEGHGNGLRYCVSSMQG-WRLEMEDSHSAACRLKDPFATWS-----YFAVFDGHAGSQISLHC 75
            :.:.|.| |::|..|.::| ....|||.|.|      .|..::     .||:||||.|..::.:.
plant    23 KGRNGEG-GIKYGFSLIKGKSNHSMEDYHVA------KFTNFNGNELGLFAIFDGHKGDHVAAYL 80

  Fly    76 AEHLMSTILESESFSKHKYEAGIREGFLQLDEDMRKLYHD-----QQGGSTAI-CVFVSPDKIYL 134
            .:||.|.||:...|......| |.:.:...|:   |:..|     :.|||||: .:.::...:::
plant    81 QKHLFSNILKDGEFLVDPRRA-IAKAYENTDQ---KILADNRTDLESGGSTAVTAILINGKALWI 141

  Fly   135 VNCGDSRAVISRNGAAVISTIDHKPFSPKEQERIQNAGGSVM-----IKRINGTLAVSRAFGDYD 194
            .|.|||||::|..|.|...::||.|....|:..|::.||.|.     :.|:||.|||||.|||.:
plant   142 ANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSRVFGDKN 206

  Fly   195 FKNDGSKSPVDQMVSPEPDIIVCNRSEHDEFIVVACDGIWDVMTSSEVCEFIRSRLLVTYDLPMI 259
            .|         ..::.||:|.......|.:|:::|.|||..||::.|..:..:.    ..|....
plant   207 LK---------AYLNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKK----LKDPKEA 258

  Fly   260 VNSVLDICLHKGSRDNMTLLLL 281
            ...|:...|.:.|:|:::.:::
plant   259 ARQVVAEALKRNSKDDISCIVV 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 78/266 (29%)
PP2C_C 284..355 CDD:429684
AT1G78200NP_565172.1 PP2Cc 31..282 CDD:238083 78/273 (29%)
Blue background indicates that the domain is not in the aligned region.

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