DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nil and HAI1

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_200730.1 Gene:HAI1 / 836040 AraportID:AT5G59220 Length:413 Species:Arabidopsis thaliana


Alignment Length:243 Identity:83/243 - (34%)
Similarity:129/243 - (53%) Gaps:32/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RYCVSSMQGWRLEMEDS---HSAACRLKDPFAT--WSYFAVFDGHAGSQISLHCAEHLMSTILES 86
            :|.|:|:.|.|.||||:   |....|.:..:::  :.|..|:|||..|.:::.|.|.|...:.| 
plant   111 KYGVASVCGRRREMEDAVAVHPFFSRHQTEYSSTGFHYCGVYDGHGCSHVAMKCRERLHELVRE- 174

  Fly    87 ESFSKHKYEAGIREGFLQLDEDMRKLYHDQQG--------------GSTAICVFVSPDKIYLVNC 137
            |..:...:|..:...|.::|.::..|..|...              ||||:...::|:||.:.||
plant   175 EFEADADWEKSMARSFTRMDMEVVALNADGAAKCRCELQRPDCDAVGSTAVVSVLTPEKIIVANC 239

  Fly   138 GDSRAVISRNGAAVISTIDHKPFSPKEQERIQNAGGSVMI---KRINGTLAVSRAFGDYDFKNDG 199
            ||||||:.|||.|:..:.||||..|.|.:|||.|||.|:.   .|:.|.||:|||.||...|   
plant   240 GDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLK--- 301

  Fly   200 SKSPVDQMVSPEPDIIVCNRSEHDEFIVVACDGIWDVMTSSEVCEFIR 247
                  ..|...|::.|.:|:..|:|:::|.||:|||:::...|..:|
plant   302 ------PYVISRPEVTVTDRANGDDFLILASDGLWDVVSNETACSVVR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 83/243 (34%)
PP2C_C 284..355 CDD:429684
HAI1NP_200730.1 PP2Cc 112..347 CDD:214625 83/242 (34%)
Blue background indicates that the domain is not in the aligned region.

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