DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nil and AT4G38520

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_195564.2 Gene:AT4G38520 / 830009 AraportID:AT4G38520 Length:400 Species:Arabidopsis thaliana


Alignment Length:296 Identity:74/296 - (25%)
Similarity:129/296 - (43%) Gaps:65/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PETEKQAQEGHGNGLR-----------------YCVSSMQGWRLEMED-----SHSAACRLKDPF 54
            |.:::||:....:|.|                 :.::.:|...| :||     |.|.:.....||
plant    15 PRSDQQARSASDSGGRQEGLLWFRDSGQHVFGDFSMAVVQANSL-LEDQSQLESGSLSSHDSGPF 78

  Fly    55 ATWSYFAVFDGHAGSQ----ISLHCAEHLMSTILESESFS----KHKYEAGIREGFLQLDEDMRK 111
            .|  :..|:|||.|.:    |:.|...||.....|.:..|    |..::| ..||||.:..:  :
plant    79 GT--FVGVYDGHGGPETSRFINDHMFHHLKRFTAEQQCMSSEVIKKAFQA-TEEGFLSIVTN--Q 138

  Fly   112 LYHDQQGGSTAICVFVS---PDKIYLVNCGDSRAVISR----NGAAVISTI--DHKPFSPKEQER 167
            .....|..:...|..||   ..|:|:.|.||||||:.:    .|.|..:.:  :|.......:..
plant   139 FQTRPQIATVGSCCLVSVICDGKLYVANAGDSRAVLGQVMRVTGEAHATQLSAEHNASIESVRRE 203

  Fly   168 IQ----NAGGSVMIK----RINGTLAVSRAFGD-YDFKNDGSKSPV-----------DQMVSPEP 212
            :|    :....|::|    |:.|.:.|||:.|| |..:::.::.|:           ..::|.||
plant   204 LQALHPDHPDIVVLKHNVWRVKGIIQVSRSIGDVYLKRSEFNREPLYAKFRLRSPFSKPLLSAEP 268

  Fly   213 DIIVCNRSEHDEFIVVACDGIWDVMTSSEVCEFIRS 248
            .|.|.....||:||:.|.||:|:.|::.|..:.:::
plant   269 AITVHTLEPHDQFIICASDGLWEHMSNQEAVDIVQN 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 70/281 (25%)
PP2C_C 284..355 CDD:429684
AT4G38520NP_195564.2 PP2Cc 74..353 CDD:214625 63/236 (27%)
Blue background indicates that the domain is not in the aligned region.

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