DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nil and AT3G17090

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_566566.1 Gene:AT3G17090 / 820966 AraportID:AT3G17090 Length:384 Species:Arabidopsis thaliana


Alignment Length:290 Identity:54/290 - (18%)
Similarity:120/290 - (41%) Gaps:78/290 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SYFAVFDGHAGSQISLHCAEHLMSTILESESFSK------------HKYEAGIREGFLQLDEDM- 109
            ::..|:|||.|.:.:.:..:||.:...|..:.::            |..|    |||..:..:: 
plant    83 TFVGVYDGHGGPEAARYVCDHLFNHFREISAETQGVVTRETIERAFHATE----EGFASIVSELW 143

  Fly   110 RKLYHDQQGGSTAICVFVSPDKIYLVNCGDSRAVISRNG-----AAVISTIDH-----------K 158
            :::.:....|:..:...:..:.:::.:.||||.|:.:.|     :|:..:.:|           |
plant   144 QEIPNLATVGTCCLVGVIYQNTLFVASLGDSRVVLGKKGNCGGLSAIQLSTEHNANNEDIRWELK 208

  Fly   159 PFSPKEQERIQNAGGSVMIKRINGTLAVSRAFGD-YDFKNDGSKSPVDQ-----------MVSPE 211
            ...|.:.:.:....|   :.|:.|.:.|||:.|| |..:.:.:|.|:.|           ::|..
plant   209 DLHPDDPQIVVFRHG---VWRVKGIIQVSRSIGDMYMKRPEFNKEPISQKFRIAEPMKRPLMSAT 270

  Fly   212 PDIIVCNRSEHDEFIVVACDGIWDVMTSSEVCEFIRSRLLVTYDLPMI--VNSVLDICLHKGSR- 273
            |.|:......:|.|::.|.||:|:.:|:.:..|.:.:.       |..  ...::...||:.:| 
plant   271 PTILSHPLHPNDSFLIFASDGLWEHLTNEKAVEIVHNH-------PRAGSAKRLIKAALHEAARK 328

  Fly   274 --------------------DNMTLLLLLL 283
                                |::|::::.|
plant   329 REMRYSDLRKIDKKVRRHFHDDITVIVVFL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 52/282 (18%)
PP2C_C 284..355 CDD:429684 54/290 (19%)
AT3G17090NP_566566.1 PP2Cc 59..358 CDD:238083 53/288 (18%)

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