DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nil and pdp1

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_012820338.1 Gene:pdp1 / 779724 XenbaseID:XB-GENE-481257 Length:561 Species:Xenopus tropicalis


Alignment Length:351 Identity:82/351 - (23%)
Similarity:121/351 - (34%) Gaps:131/351 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VSSMQGW-------RLEMEDSHSAACRLKDPFATWSYFAVFDGHAGSQISLHCAEHL-------- 79
            :||:.|:       ...:||..|||..|:   :......|||||||...:...:|.|        
 Frog   135 ISSILGFDSNQLPANAPIEDRRSAATCLQ---SRGMLLGVFDGHAGCACAQAVSERLFYYIAVSL 196

  Fly    80 --MSTILESES---------------------FSKHK---YEAGIR------------------- 99
              ..|:||.|:                     |||..   |...:|                   
 Frog   197 LPQETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNSLRTYWQELIDLNTGETTDVKE 261

  Fly   100 ---EGFLQLDEDMRKLYHDQQG----------------GSTAICVFVSPDKIYLVNCGDSRAVI- 144
               ..|.:||.|:.  ...|.|                |:||....|....:::.|.|||||:: 
 Frog   262 ALINSFKRLDNDLS--LEAQVGDPNSFLNYWVLRVAFSGATACVAHVDGVDLHVANTGDSRALLG 324

  Fly   145 --SRNG--AAVISTIDH-----------KPFSPKEQERIQNAGGSVMIKRINGTLAVSRAFGDYD 194
              ..:|  :||..:.||           |...|||.:.:      |...|:.|.|...|||||..
 Frog   325 VQEEDGSWSAVTMSHDHNAQNDSEVLRLKSEHPKEVKSV------VKQDRLLGLLMPFRAFGDVK 383

  Fly   195 FK-----------------NDGSKS---PVDQMVSP----EPDIIVCNRSEHDEFIVVACDGIWD 235
            ||                 ||...:   |.:....|    ||::|.......|:|:::|.||:|:
 Frog   384 FKWSIDLQKRVVESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVIYHRLRPKDKFLILATDGLWE 448

  Fly   236 VMTSSEVCEFIRSRLL-VTYDLPMIV 260
            .|...:|...:...|. |.:..|:.|
 Frog   449 TMHRQDVVRIVGEYLTGVHHQQPLAV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 82/351 (23%)
PP2C_C 284..355 CDD:429684
pdp1XP_012820338.1 PP2Cc 138..551 CDD:238083 80/348 (23%)
Blue background indicates that the domain is not in the aligned region.

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