DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nil and Ppm1m

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001417327.1 Gene:Ppm1m / 686298 RGDID:1584266 Length:461 Species:Rattus norvegicus


Alignment Length:368 Identity:85/368 - (23%)
Similarity:138/368 - (37%) Gaps:131/368 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EKPE-TEKQAQEGHGNGLRYCVSSMQGWRLEMEDSHSAACRLKDPFATWSYFAVFDGHAG----- 68
            ||.| .|.||..|     :.|:...: :.:|.:......|  .:.|.|..|:|:||||.|     
  Rat    80 EKSEFNEDQAACG-----KLCIRRCE-FGIEEDQEWLTVC--PEEFLTGHYWALFDGHGGPAAAI 136

  Fly    69 -SQISLH-CAEHLMSTILES----------------ESFSKHKYEAGIR----------EGFLQL 105
             :..:|| |....:..::|.                .|..:...|.|||          ..|.:.
  Rat   137 LAANTLHSCLRRQLEVVVEGMMAAQPPMHLSGRCVCSSDPQFVEEKGIRAEDLVIGALENAFQEC 201

  Fly   106 DEDM-RKL-YHDQQGGSTAICVFVSPDKIYLVNCGDSRAV-ISRNGAAVISTIDHKPFSPK-EQE 166
            |:.: |:| ...|.||.||:.......|:|:.|.|||||: :.|:...::|:    .|:|: |::
  Rat   202 DDVIGRELEASGQVGGCTALVAVFLQGKLYVANAGDSRAILVRRDEIRLLSS----EFTPETERQ 262

  Fly   167 RIQ--------------------------NAGGSVMIK--------------------------- 178
            |||                          :.|..|:.:                           
  Rat   263 RIQQLAFTYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMRGWSYKQVEKTDLKYPLIHGQGR 327

  Fly   179 --RINGTLAVSRAFGDYDFK---NDGSKSP------------VDQMVSPEPDIIVCNRSEHDEFI 226
              |:.|||||||..||:..:   .|....|            |||:...|.|:           :
  Rat   328 QARLLGTLAVSRGLGDHQLRVLDTDIQLKPFLLSIPQVTVLDVDQLALQEDDV-----------V 381

  Fly   227 VVACDGIWDVMTSSEVCEFIRSRLLVTYDLPMIVNSVLDICLH 269
            |:|.||:|||:::.:|...:||.|....:.|...:.:..:.:|
  Rat   382 VMATDGLWDVLSNEQVALLVRSFLTGNREDPHRFSELAKMLIH 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 78/350 (22%)
PP2C_C 284..355 CDD:429684
Ppm1mNP_001417327.1 None
Blue background indicates that the domain is not in the aligned region.

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