DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6036 and alph

DIOPT Version :9

Sequence 1:NP_651472.2 Gene:CG6036 / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster


Alignment Length:365 Identity:195/365 - (53%)
Similarity:263/365 - (72%) Gaps:6/365 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MGGFLEKPETEKQAQEGHGNGLRYCVSSMQGWRLEMEDSHSAACRLKDPFATWSYFAVFDGHAGS 69
            |||||:||:|.|...||.||.|.:.||||||||.||||::.|...|.|....||:|||||||||.
  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGC 65

  Fly    70 QISLHCAEHLMSTILESESFSKHKYEAGIREGFLQLDEDMRKL-----YHDQQGGSTAICVFVSP 129
            ::|.|||:||:.:|:.:|.|....:..|||.|||::||.||:|     ..::.||:||:|.||..
  Fly    66 KVSEHCAKHLLESIISTEEFIGGDHVKGIRTGFLRIDEVMRELPEFTRESEKCGGTTAVCAFVGL 130

  Fly   130 DKIYLVNCGDSRAVISRNGAAVISTIDHKPFSPKEQERIQNAGGSVMIKRINGTLAVSRAFGDYD 194
            .::|:.||||||||:.|.|..|.:|.||||..|:|:|||.||||||||||:|||||||||.||||
  Fly   131 TQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRALGDYD 195

  Fly   195 FKNDGSKSPVDQMVSPEPDIIVCNRSEHDEFIVVACDGIWDVMTSSEVCEFIRSRLLVTYDLPMI 259
            |||...|...:|:|||||:|...:|.:.|||:|:|||||||||::.:||.||.||:.||.:|..|
  Fly   196 FKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVSI 260

  Fly   260 VNSVLDICLHKGSRDNMTLLLLLLPGAPKVDMDAVKAERSLDQTIVQITKEVIEKHEIHDFETLI 324
            .|.|:|.||||||||||:::::..|||||...:|::||..|::.|.:||::.||..:|.|:..|:
  Fly   261 ANQVVDTCLHKGSRDNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITRDEIESSKITDYVDLL 325

  Fly   325 RLMKRMAINIPNLPPGGGLYAKYYIIEQAFHEKFPDTPAE 364
            :.::... :|..|||||||.:||::||:.|.::|||.|.|
  Fly   326 KCLQNRD-DIEGLPPGGGLQSKYHVIERTFKQEFPDRPCE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6036NP_651472.2 PP2Cc 27..277 CDD:238083 145/254 (57%)
PP2C_C 284..352 CDD:285117 28/67 (42%)
alphNP_651701.1 PP2Cc 24..284 CDD:238083 146/259 (56%)
PP2C_C 278..352 CDD:285117 28/74 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438652
Domainoid 1 1.000 61 1.000 Domainoid score I10412
eggNOG 1 0.900 - - E1_COG0631
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 281 1.000 Inparanoid score I1754
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoDB 1 1.010 - - D262211at33208
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 1 1.000 - - mtm6495
orthoMCL 1 0.900 - - OOG6_100270
Panther 1 1.100 - - P PTHR47992
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X444
1211.810

Return to query results.
Submit another query.