DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nil and Pp2C1

DIOPT Version :10

Sequence 1:NP_651472.2 Gene:Nil / 43185 FlyBaseID:FBgn0039421 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_313565.5 Gene:Pp2C1 / 1274435 VectorBaseID:AGAMI1_008076 Length:1051 Species:Anopheles gambiae


Alignment Length:388 Identity:105/388 - (27%)
Similarity:166/388 - (42%) Gaps:106/388 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GNGLRYCVSSMQGWRLEMEDSHSAACRL--KDPFATWSYFAVFDGHAGSQISLHCAEHLMSTILE 85
            |..||....:..|.|...||..|.|.:.  .|....::||.::|||.|::.||:..||||:||:.
Mosquito     4 GVNLRVTGHTSIGGRKYQEDYFSVAYQQTENDQNLEYAYFGIYDGHGGAEASLYAKEHLMNTIVS 68

  Fly    86 SESFSKHKYE---AGIREGFLQLDEDMRKLYHDQQ------------GGSTAICVFVSPDKIYLV 135
            .:.|.....:   ..||||::|....|   :.:|:            .|:||...|:...|||:.
Mosquito    69 QKLFWSENDDDVLKSIREGYIQTHYSM---WREQEKWPKTSSGLPSTAGTTASIAFIRRGKIYIG 130

  Fly   136 NCGDSRAVI--------SRNGAAVIS--TIDHKPFSPKEQERIQNAGGSVMIK-----------R 179
            :.|||..|:        :.:|..|.:  |.||||.|..|:.||.:.||.|:.|           |
Mosquito   131 HVGDSGIVLGYQNDKESANDGRWVATPLTEDHKPESYAEKMRIMSCGGKVVTKSGVPRVVWNRPR 195

  Fly   180 INGT--------------LAVSRAFGDYDFKNDGSKSPVDQ-MVSPEPDIIVCNRSEHD----EF 225
            |...              |||:|:.||....|    |.:|: :|||.||:.|.   |.|    ..
Mosquito   196 IGHKGPVRRSTPIDEIPFLAVARSLGDLWSYN----SAMDEFVVSPVPDVSVI---EIDPKKYRC 253

  Fly   226 IVVACDGIWDVMTSSEVCEFIRSRLLVTYDL------------PMIVNSVLDICLHKGSR----- 273
            ::...||:|:||:.....:.:|:..:....:            .::||..||    :.||     
Mosquito   254 LIFGSDGLWNVMSPKNAVDIVRNAEMENVRIALEGGNEWKNPSKLLVNEALD----RWSRSNMKA 314

  Fly   274 DNMTLLLLLL--PGAPKVDMDAVKAERSLDQTIVQITKEVIEKHE---------IHDFETLIR 325
            ||.::::::|  ||.||.|:     .:|:..||.....:  :.|.         ||.|:.:.|
Mosquito   315 DNTSVVIIMLDPPGPPKRDV-----LKSVKDTIQHAAND--QPHAGTGAAGSNIIHLFDCITR 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NilNP_651472.2 PP2Cc 27..277 CDD:238083 89/323 (28%)
PP2C_C 284..355 CDD:429684 13/51 (25%)
Pp2C1XP_313565.5 None

Return to query results.
Submit another query.