DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6073 and HGH1

DIOPT Version :9

Sequence 1:NP_001247313.1 Gene:CG6073 / 43180 FlyBaseID:FBgn0039417 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_011703.3 Gene:HGH1 / 853099 SGDID:S000003419 Length:394 Species:Saccharomyces cerevisiae


Alignment Length:402 Identity:105/402 - (26%)
Similarity:183/402 - (45%) Gaps:63/402 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKELVQFMQPNQRLDLKAVALTHVLGLTGSSEGKSAILSLDEM--LMAIFGLTFD---ANQTVAK 63
            :.|||:|:...|.. ::.:|:.:::|.:.....|  :...|..  :..|..:..|   ..:.:.:
Yeast     5 LNELVEFLHSPQPA-VRQIAIDNLVGFSAGPTSK--VFKNDSYRPIKDIIKMIMDPEHGTRVIIQ 66

  Fly    64 DAVLSLINLTSEEEAAIKVFQLAKQLQPPFAIVEVAAKEITNEQSDLADPWSMVLSNLT------ 122
            ..|..|:|| ||::....:.....:....|.:.::.  ::||..:|:   ..::||||.      
Yeast    67 QGVTILVNL-SEDKLVRNIILSDDKKFLKFLVWKIV--DLTNPNADI---MCILLSNLAKDDGIL 125

  Fly   123 ------------------RVESLVHEILDTLERDDHTLPRLAKAFAQLDYNKKKAK---LHYLAP 166
                              ::.:|..|:..:|...|..:....|.     |:||..|   .:|||.
Yeast   126 AVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFVKG-----YDKKLTKYASFNYLAF 185

  Fly   167 IFCNLTQVSRGRELCC-HRKYE---LLEKLLPFASFEGSVVRRGGTIGILKNVCFDTVYHDVIL- 226
            .|.::::...||.... .::|:   .:.|||.|.....:.|||.|....:||..||:..|:.:| 
Yeast   186 FFADISRFKLGRMYFIEEQEYDGVVPISKLLVFTEKYDAKVRREGVASTIKNSLFDSETHERLLK 250

  Fly   227 NEQSSILVAILQPLCGPE--EFSDEDNELLPIELQYLPESKTREEDPDLRKMLLECLLQLCSTRR 289
            :|:.::|..||.|:...:  |..:||...||.|||.|||.|.|:..|.:....||.:|.||:|..
Yeast   251 DEKINLLPYILLPIASAKDSEIDEEDMFNLPDELQLLPEDKERDPIPAIICCHLESILLLCTTHA 315

  Fly   290 SREILRSRGVYEILREYHKWEAKVGKDSDCLLACENVVDILIKKE------EEIGLDNYKTEVEV 348
            .||.||.:.||.::||.||   .| ::.|....|..:|::|::.|      ||:...|.:.|.|.
Yeast   316 GREYLRDKSVYPLVRELHK---NV-ENEDIGELCYRIVNMLMRGEPGAGAVEEMPSKNAEEEEEE 376

  Fly   349 PAEQSEKFVQED 360
            .:|:.|...:||
Yeast   377 ESEEEEDDDEED 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6073NP_001247313.1 DUF383 103..275 CDD:281984 56/205 (27%)
DUF384 280..337 CDD:281985 21/62 (34%)
HGH1NP_011703.3 DUF383 99..301 CDD:397949 56/211 (27%)
DUF384 306..360 CDD:397950 20/57 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346544
Domainoid 1 1.000 56 1.000 Domainoid score I2709
eggNOG 1 0.900 - - E1_KOG2973
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48742
Inparanoid 1 1.050 96 1.000 Inparanoid score I1502
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54604
OrthoFinder 1 1.000 - - FOG0004316
OrthoInspector 1 1.000 - - oto100147
orthoMCL 1 0.900 - - OOG6_103137
Panther 1 1.100 - - LDO PTHR13387
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R426
SonicParanoid 1 1.000 - - X3587
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.